Gene Information

Name : CHU_2941 (CHU_2941)
Accession : YP_679525.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Virulence
Product : restriction/modification methyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 3363101 - 3365452 bp
Length : 2352 bp
Strand : -
Note : -

DNA sequence :
ATGAATCAGGCAGTACACAATAAACTAGTATCCTTTATTTGGTCTATCGCAGACGATTGTTTGCGTGATGTATATGTACG
AGGGAAGTACCGGGATGTGATTTTGCCCATGGTGGTATTGAGGAGATTAGACGCACTCCTTGAACCAACCAAAGATGCTG
TATTGGAAGAGATGGCTTTTCAGAAAGATGAAGCCAAGTTTACAGAGTGGGATGAAAATGGATTGCGCCAGGCAAGTGGT
TATGTCTTTTACAATACGAGCGAATGGACGTTGCAAAGGCTACACGATACGGCAACCAATAATCAACAAATTCTTCAGGC
TAATTTTGAAGACTATTTAAAAGGGTATAGTGGCAACGTAAAAGAGATCATTGAGAAATTTAATCTTAAAAGGCAAGTTC
AGCACATGGCATCGAAAGATGTTTTGTTGAATGTATTAGAGAAATTTACTTCGTCGTATATCAATCTTACTCCTTTTGAA
AAAAATGATCCTGATGGAAGAAAGCTTCCGCCCTTAAGCAATCTTGGGATGGGTTATGTGTTTGAAGAACTGATCCGTAA
ATTCAATGAAGACAATAACGAAGAAGCTGGGGAGCACTTTACACCGCGCGAAGTAATTGATTTGATGACGCATATTATTT
TTGAACCCATCAAAGACAAACTTCCTCCGGTAATGACCATTTACGATCCTGCCTGTGGAAGCGGTGGTATGCTTACAGAA
TCACAGAATTTTATCAAGGATGAAGATGGTGAAATAAAAGCTAAAGGAGATGTGTATTTGTACGGCAAGGAAATCAATGA
TGAAACCTATGCCATTTGCAAATCAGATATGATGATTAAGGGGAATAACCCTGAAAACATTCGTGTAGGTTCTACGCTTT
CAACCAATGAATTTGCTGGTACTACGTTTGATTTTATGCTTTCCAATCCGCCCTATGGTAAGTCCTGGGCGAGTGAGCAA
AAGTTTATAAAAGATGGGAAAGATATTATTGATCCTCGTTTTAAAATCAAGCTTCAAAACTATTGGGGAATTGAAGAAGA
AGCAGATGCCACACCACGCTCTTCAGATGGGCAATTACTTTTCCTGATGGAAATGGTGAATAAAATGAAACCGCTTTCTC
AAAGTAAATTGGGCTCGCGCATTGCATCGGTGCATAATGGTAGTAGTTTGTTTACAGGTGATGCCGGTGGAGGCGAAAGC
AATATCCGCAGGTATATTATTGAAAACGATTGGTTGGAAGCCATTGTGCAAATGCCGAATAACTTGTTTTACAATACGGG
TATCACTACCTATATCTGGATTTTAAGCAACAACAAATCGAACAAAAGAAAAGGCAAGGTGCAGTTGATTGATGCCGGTT
TTATGTTCCGTAAACTGCGTAAAAACTTAGGAAATAAAAACTGTGAGTTTGCTCCCGAGCACATACGCGAGATCGTATCT
GTCTACGAGAAGATGCAGGCTGTTGACCGAAAGGTTGATGATGAACAAGGGATTTCTTCAAAAGTTTTTGATAACACAGA
TTTTGGATATTACAAAGTTACCATTGAACGACCAAAACGTTTGAAAGCACAATTCACAGCTGAACGTATTGAAGAACTTC
GTTTTGATAAAACCCTGCGCGAACCGATGGCCTGGGCCTACGAAACGTATAGGGAAAAAGTATATACCGAAATTGCCAAA
CATGAAAAGGCAATTATTGAGTGGTGCGAAAAAAATGAGTTAAACTTAAATGCCAAGCAAACTAAGACACTTGTAACTCA
AGCTACCTGGCAAAAACAGTTGGACCTGGTAACACTTGCTATGGATCTAATGAAAAAAATAGGATCGAAAGAGTTCAATG
ATTTTAATCTTTTTAAAGAAAGGGTAGACGAAGCATTAGCCGCAAAAAAACTAAAGCTTTCTTCTTCTGAAAAAAATGCG
ATTCTGAATGCAGTTAGCTGGTATGATGCAGATGCTGAAAAGGTGGTAAAAGGAACAACGAAATTAGCAGGCGATAAACT
AAAAGAACTGCTTGCCTATTTGGGTTGCAAAGAAAAAGAATTGGGTGATTACGGTTACTTTGCAACGGAGAAAAAAGGCG
AATACCTGGAATACGAAACAGAAAGTAATTTGCGTGATACCGAAAATGTACCGCTGAAAGAGGCTATTTATACCTACTTT
TTGCGTGAAGTAAAACCACATGTAGGCGAAGCCTGGATCAATTTAGATGCTACCAAAATCGGATATGAAATAAGTTTTAA
TAAATATTTCTATAAGCATAAACCCTTACGAAGCATTGAAGATGTTACGGCAGACATCCTGGCCTTGGAAAAGGAAAGCG
ATGGACTGATTGCAGAAATTTTAGGATTGTAA

Protein sequence :
MNQAVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDALLEPTKDAVLEEMAFQKDEAKFTEWDENGLRQASG
YVFYNTSEWTLQRLHDTATNNQQILQANFEDYLKGYSGNVKEIIEKFNLKRQVQHMASKDVLLNVLEKFTSSYINLTPFE
KNDPDGRKLPPLSNLGMGYVFEELIRKFNEDNNEEAGEHFTPREVIDLMTHIIFEPIKDKLPPVMTIYDPACGSGGMLTE
SQNFIKDEDGEIKAKGDVYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTNEFAGTTFDFMLSNPPYGKSWASEQ
KFIKDGKDIIDPRFKIKLQNYWGIEEEADATPRSSDGQLLFLMEMVNKMKPLSQSKLGSRIASVHNGSSLFTGDAGGGES
NIRRYIIENDWLEAIVQMPNNLFYNTGITTYIWILSNNKSNKRKGKVQLIDAGFMFRKLRKNLGNKNCEFAPEHIREIVS
VYEKMQAVDRKVDDEQGISSKVFDNTDFGYYKVTIERPKRLKAQFTAERIEELRFDKTLREPMAWAYETYREKVYTEIAK
HEKAIIEWCEKNELNLNAKQTKTLVTQATWQKQLDLVTLAMDLMKKIGSKEFNDFNLFKERVDEALAAKKLKLSSSEKNA
ILNAVSWYDADAEKVVKGTTKLAGDKLKELLAYLGCKEKELGDYGYFATEKKGEYLEYETESNLRDTENVPLKEAIYTYF
LREVKPHVGEAWINLDATKIGYEISFNKYFYKHKPLRSIEDVTADILALEKESDGLIAEILGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 68
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 68
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHU_2941 YP_679525.1 restriction/modification methyltransferase VFG1102 Protein 0.0 68