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Name : hsdR (CHU_2936) Accession : YP_679520.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Virulence Product : restriction enzyme type I helicase subunit; type I restriction enzyme HsdR Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 3354118 - 3357222 bp Length : 3105 bp Strand : - Note : - DNA sequence : ATGCCGTCACAAACCAACGAACAAGCCTTAGAATCTTCCATAGAAAAGTGCTTAACGGGTACAAGTCTGGAACAATTGAA GGAACAAAAAGTTTCTCTGCATATTGCAAACGAGCGCAGAGAATTGTACCGTGCTGGTAATGGCTATTATATTGGCTCCC CCGAAGATTTTAATGCACAGTTTGCTCTCGATGAAAAACGCTTTTGGGATTTTTTGGAAACTACCCAACAAGAAGAGTTG AGCAAACTGCAAAAGCAAAGCGATTGGAAACTTAAGATTATAGAGCGCCTTAACTATACTGTAAAGAAGTATGGCATTCT GCGTTTGTTTCGCAAAGGTCTGGATATAGACGATGCACACTTTACCTTATTGTATCCATTACCTTTAGCCAGCAGCAGCG AGACCGTACGCACAAATTTTGAAAGCAATCAATTCAGTGTTACGCGTCAGCTTCGGTATTCACTCATCAATACCAAAGAA GAAATAGACATGGTACTTTTTGTAAACGGCTTGCCCTTTGCAACCATGGAATTAAAAAACCATTGGACCGGACAGAATGC AAAAGTACACGGGCAAAATCAATATAAGACCAAACGTGACATTAATCAACCGCTGCTCAACTTCGGTCGCTGCATTGTAC ACTTTGCCGTAGATACCGATGAAGCATACATGACCACCCGATTAAATGGAAATGATACCTTCTTTCTTCCATTCAATTTA GGACAACGGGAACCCTTGTTTGGTAAAGGCAATCCGGTAAATCCATTTGGTCATAAGACATCCTATATGTGGGAAGAAAT ATTTACCCGGAAAAGCATTGCCAATATCATTCAGCATTTTGTCCGTTTCGATGGCAAAGAAACCGATCCGCTAAGTAAAA AGACTTTGTATTTCCCACGCTATCATCAATTGGATGTGGTGCGTAAACTTGTAGACGATGCTAGTAAAAAAGGCGTAGGA CAAACGTATTTAATACAACACTCTGCAGGTTCGGGCAAATCCAATTCCATTACCTGGGCAGCCTATCAACTGATCGAAAC CTATCCGGAAAGCGATAACTTGCCGGGCAGCAAAGGTGTCTCAAATCCATTGTTTGATTCCGTAATCGTTGTAACCGATC GCAGGTTGTTAGACAAACAGATTCGCGAAAACATCAAAGAGTTTTCGGAAGTAAAAAATATTGTTGCGCCTGCTTATTCA TCTAAAGAGTTAAAAGAAAGTTTGGAGAGCGGTAAAAAAATTATCATTACCACCATACAAAAATTCCCCTTCATTGTAGA CGGCATTGCCGATTTAAGTGATAAACGTTTTGCTGTTATTATAGATGAAGCACACAGCAGTCAGAGTGGCACTTCGGCAG GCACCATGAATCAGGTCATGGGAAATGCTGCAGGGGATGCTACTGAAGACGAAGAAATAGATCCACAAGATAAAATACTG GAGGCCATGCGCGCACGTAAGATGCGTGGCAATGCATCGTATCTGGCTTTTACGGCTACGCCTAAAAACAATACGCTTGA GCGCTTTGGTGTAAAACAGGAAGATGGAAAGTATAAACCTTTTCATTTGTATTCCATGAAACAAGCCATAGAAGAAGGTT TTATCCTGGATGTGCTTGCCAATTATACTACATACAAAAGCTATTACGAAATTGAAAAATCCATTGAGGATAATCCCTTA TTCGAAACGGTAAAAGCACAGAAGAAATTACGTACCTACGTAGAGCAGAACAAACAAACCATTGCAACCAAAGCAGATAT TATGCTTGACCATTTCATGACGAAATTGGTTAATACCAAAAGGCTGAAAGGAAAGGCAAAGGCAATGGTTGCAACACAAA GTATTGAGTCTGCTATCAACTATTATTTTGCCTTAAAGAAACTGTTAGACGAACAAGGCAATCCATTCAAAATAGCCATT GCTTTTTCAGGCGTTAAAAAAATAAAAGGCATTGAATACACCGAAGACAGTCTGAATGATTTTCCTGCACACCTGGATAC AGCAAAACCAAGTGATCCCGGATATATCAGCGATAAAATTGCACGTTTCGTAAATATGGATGAATACCGCATGTTGGTTG TGGCAAACAAATACCTTACGGGCTATGACCAGCCTAAGCTTACTGCTATGTACGTTGATAAGAAACTACAAGGAGTCATT GCCGTGCAGGCCTTATCCCGTTTGAATCGTTCGGCAGATAAGCTCGGCAAGAAAACAGAAGATTTATTCATACTCGATTT TTACAATACTACTGAAGATATTAAGAAAGCATTCGATCCATTTTATACCGCAACATCGTTGAGCAAAGCAACCGACATAA ATGTGTTGCATGAATTAAAATCTAATCTGGATGATACAGGGGTATATGAATGGAGTGAAGTAGAAGATTTTGTAGAGAAG TATTTTAAGGGGGTAAATGCACAAGAGCTTAGTCCCATTGTTGAGGTTGCAGCAGAACGTTTTAATGTAACCTTAGAATT AGATGATAAGGCGAAGGCCGATTATAAAATTAAAGCAAAACACTTTGTAAAGATCTATGGACAAATGGCTTCTATTATGC ACTATGAAGTGCAGGCTTGGGAAAAGTTGTTTTGGTTTTTGAAATTTTTAATTCCTAAACTCATTATTGTAGACAATGCA AGTGATGTCTTGGATGGCTTGCTGAATTCTGTTGATCTTTCAACCTATGGTTTAGAACGAGTGAAATTAAATACAACGAT CGTACTTGACGCTGCTGAAACAGAAGTTGATCCACAAAATCCCAATCCAAGAGGCGCACATGGCGGCGATTCGGAAGAAG ACGAACTAGACTTAATTATTAAAAGCTTTAACGAACGTTGGTTTCAGGGCTGGGATGCTACGCCTGATCAACAGCGAGCA AAATTTGTTGTCATCGCACAGCGAATGCAAGCCCATTCTGATTACAATGAGAAATATGCAGAGAATTCAGACATACAAAA CCGAGCTATTGCATTCGCAAAAATAATTGATGACGTAATGGGTAAGCAGCGCAAAACAGATATGGACCTTTATCGTTTAT ATTCTCAAGACGAAGGTTTTAAAATAGCGATGCAGGATACGATTAAACGGATATTGAGAAATTAG Protein sequence : MPSQTNEQALESSIEKCLTGTSLEQLKEQKVSLHIANERRELYRAGNGYYIGSPEDFNAQFALDEKRFWDFLETTQQEEL SKLQKQSDWKLKIIERLNYTVKKYGILRLFRKGLDIDDAHFTLLYPLPLASSSETVRTNFESNQFSVTRQLRYSLINTKE EIDMVLFVNGLPFATMELKNHWTGQNAKVHGQNQYKTKRDINQPLLNFGRCIVHFAVDTDEAYMTTRLNGNDTFFLPFNL GQREPLFGKGNPVNPFGHKTSYMWEEIFTRKSIANIIQHFVRFDGKETDPLSKKTLYFPRYHQLDVVRKLVDDASKKGVG QTYLIQHSAGSGKSNSITWAAYQLIETYPESDNLPGSKGVSNPLFDSVIVVTDRRLLDKQIRENIKEFSEVKNIVAPAYS SKELKESLESGKKIIITTIQKFPFIVDGIADLSDKRFAVIIDEAHSSQSGTSAGTMNQVMGNAAGDATEDEEIDPQDKIL EAMRARKMRGNASYLAFTATPKNNTLERFGVKQEDGKYKPFHLYSMKQAIEEGFILDVLANYTTYKSYYEIEKSIEDNPL FETVKAQKKLRTYVEQNKQTIATKADIMLDHFMTKLVNTKRLKGKAKAMVATQSIESAINYYFALKKLLDEQGNPFKIAI AFSGVKKIKGIEYTEDSLNDFPAHLDTAKPSDPGYISDKIARFVNMDEYRMLVVANKYLTGYDQPKLTAMYVDKKLQGVI AVQALSRLNRSADKLGKKTEDLFILDFYNTTEDIKKAFDPFYTATSLSKATDINVLHELKSNLDDTGVYEWSEVEDFVEK YFKGVNAQELSPIVEVAAERFNVTLELDDKAKADYKIKAKHFVKIYGQMASIMHYEVQAWEKLFWFLKFLIPKLIIVDNA SDVLDGLLNSVDLSTYGLERVKLNTTIVLDAAETEVDPQNPNPRGAHGGDSEEDELDLIIKSFNERWFQGWDATPDQQRA KFVVIAQRMQAHSDYNEKYAENSDIQNRAIAFAKIIDDVMGKQRKTDMDLYRLYSQDEGFKIAMQDTIKRILRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 64 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 64 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hsdR | YP_679520.1 | restriction enzyme type I helicase subunit; type I restriction enzyme HsdR | VFG1098 | Protein | 0.0 | 64 |
