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Name : yajR (CHU_0266) Accession : YP_676898.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Resistance Product : tetracycline resistance protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 322881 - 324098 bp Length : 1218 bp Strand : + Note : - DNA sequence : ATGACATCACATAAAAAAGCCGGGCTCGGGTTTGTTTTTGTAACCTTATTAATAGATGTAATCGGCATCGGCATTATTCT GCCGGTTATTCCGGATCTGATCAAAGACCTTACCGGCGAAGGGTTGAGTGAGGCTGCTAAATACAGCGGCTGGTTAACGT TTGCCTATGCCATTATGCAATTCTTCTTTTCACCTGTTCTCGGCGCCTTAAGTGATACGTATGGCAGACGTCCGATACTG TTGCTGTCTTTACTTGGCTTGGGCTTTGATTATATCTTCTCTGCCTTTGCGCCAACCATCGGTTGGTTGTTTGTCGGCCG TATCCTTGCAGGTATCAGCGGTGCCAGTTTTACAACCGCCACGGCGTATATTGCAGATATCAGTACACCTGAAAACCGCA CGCAGAATTTCGGACTCGTTGGTGTCGCTTTTGGTCTTGGTTTTATTATTGGTCCTGTAGTTGGCGGCATTACCGGTGAT TGGTGGGGCCCACGCGCACCGTTTATGGTTGCTGCTGTATTTACTTTATTAAATGTACTGTACGGATATTTCTTTGTGCC CGAATCGTTGGCACAGGAAAACAGGCGAAAATTCGAATGGTCACGTGCAAATCCGATCGGTTCTTTGCTGCACTTAAAAA AATATCCCGTAGTGGCAGGGTTGATTGTTTCCATGTTTTTGTTTTTTATTGCAGGTCATTCCGTTCAATCAAACTGGTCA TTTTTCACGGAATACAGATTTAATTGGGATAATAAAATGGTTGGGTATTCATTGGGTTTTGTAGGTGTGATTATAGCTGT TGTACAAGGCTGGCTGATACGCATTATTATTCCTAAGACTGGCCAGAAGTGGGCGGTTTATCTGGGACTTTCATTGAATG CGTTAGGTTTGTTGTTGTTTGCATTTGCATCACAGGGCTGGATGATGTTTGCCATACTGGCGCCATATGCATTAGGCGGT ATTGCAGGTCCGGCGCTTCAGGGAATCACATCTGCGCAGGTGCCGGCAACAGAGCAGGGCGAACTGCAAGGTGCACTAAC CTCGCTGATGAGTGTAACAACAATTATAGGACCGCTGTTGATGAATAATTTGTTTTCGTATTTCACAGGAGCAAACGCTC CCATTGAATTACCCGGAGCTCCGTTTTTAGCAGGAGCAGTAATGGTTGGCGTTAGTGTATACCTGAGTGTACAAACATTG AGAAAATATGAAGGCTAA Protein sequence : MTSHKKAGLGFVFVTLLIDVIGIGIILPVIPDLIKDLTGEGLSEAAKYSGWLTFAYAIMQFFFSPVLGALSDTYGRRPIL LLSLLGLGFDYIFSAFAPTIGWLFVGRILAGISGASFTTATAYIADISTPENRTQNFGLVGVAFGLGFIIGPVVGGITGD WWGPRAPFMVAAVFTLLNVLYGYFFVPESLAQENRRKFEWSRANPIGSLLHLKKYPVVAGLIVSMFLFFIAGHSVQSNWS FFTEYRFNWDNKMVGYSLGFVGVIIAVVQGWLIRIIIPKTGQKWAVYLGLSLNALGLLLFAFASQGWMMFAILAPYALGG IAGPALQGITSAQVPATEQGELQGALTSLMSVTTIIGPLLMNNLFSYFTGANAPIELPGAPFLAGAVMVGVSVYLSVQTL RKYEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 5e-35 | 42 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-35 | 42 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-35 | 42 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-35 | 42 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 5e-35 | 42 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yajR | YP_676898.1 | tetracycline resistance protein | AF090987.gene.p01 | Protein | 1e-41 | 44 |
| yajR | YP_676898.1 | tetracycline resistance protein | Y19114.gene.p01 | Protein | 2e-36 | 43 |
| yajR | YP_676898.1 | tetracycline resistance protein | NC_011586.7045189.p0 | Protein | 3e-35 | 42 |
| yajR | YP_676898.1 | tetracycline resistance protein | AY264780.2.gene3.p01 | Protein | 1e-42 | 42 |
| yajR | YP_676898.1 | tetracycline resistance protein | X75761.gene.p01 | Protein | 7e-35 | 42 |
| yajR | YP_676898.1 | tetracycline resistance protein | AF534183.gene.p01 | Protein | 2e-35 | 42 |
| yajR | YP_676898.1 | tetracycline resistance protein | NC_010410.6002597.p0 | Protein | 2e-35 | 42 |
| yajR | YP_676898.1 | tetracycline resistance protein | CP001485.1.gene2821. | Protein | 2e-35 | 42 |
