Gene Information

Name : yfdH (CHU_2681)
Accession : YP_679275.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Virulence
Product : b-glycosyltransferase, glycosyltransferase family 2 protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 3065306 - 3066244 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence :
ATGGAAACACTCTCCATAATTATCCCTATATATAATGAAGAACATAATATTCCGGCTTTATATGCGCGGTTAAAAAATGT
TGTTTCATCGTTAGAGTTAACCTATGAATTTGTGTTTGTAAACGATGGCAGTAAAGACAATTCCATTACGCTGATCAAAC
AGCTGGCGTCCATTGATCCTGCCGTTAAGTATATCGACTTCAGTAGAAATTTCGGGCATCAGATTGCTGTAACAGCCGGA
TTGGATGGCTGTACAGGCGATAAGATCGTGATCATTGATGCCGATCTGCAAGACCCGCCTGAGCTGATCGGCGACATGTA
TGCGAAAATGCAGGAAGGCTATGAAGTAGTCTACGCCAAACGCAGAAGCAGAAAAGGCGAAAGCTTTTTAAAAAAATATA
CCGCACAGGTTTTTTACAGAACACTTGCCAGCATTACCTCTATTTCTATTCCTGTTGATACAGGAGACTTCCGGATGATT
GACCGTAAAATTGTAGATGTGCTAAAAAACATGCCTGAGCAGCACAAATTTTTACGTGGCCAGATTTCCTGGATCGGATT
CAACCAGACATTTGTTGAATATGACCGTGATGAACGCTTAGCCGGAGTTACAGGCTACACCTACAAAAAAATGATCCGGT
TTGCGTTAGACGGTATTACCTCTTTTTCCGATTTGCCGATCCGGTTTGCAACCATATCGGGATTTGTGGTTTCGTTTATC
GCATTTATCATTATGCTGTACGCCTTATATTCCAGATTTATCCTTCAGGATTACGTACCCGGCTGGACATCCCTGATCTT
AAGTGTCATGTTCATCGGCGGCATACAATTAATCGCTATTGGTATTATTGGTGAATACATCAGCCGCATCAGTTCCAATG
TAAGAAAACGTCCCTTATATATTGTTCGGGAAAAAACCACTACCTCAAAAAAAGACTAA

Protein sequence :
METLSIIIPIYNEEHNIPALYARLKNVVSSLELTYEFVFVNDGSKDNSITLIKQLASIDPAVKYIDFSRNFGHQIAVTAG
LDGCTGDKIVIIDADLQDPPELIGDMYAKMQEGYEVVYAKRRSRKGESFLKKYTAQVFYRTLASITSISIPVDTGDFRMI
DRKIVDVLKNMPEQHKFLRGQISWIGFNQTFVEYDRDERLAGVTGYTYKKMIRFALDGITSFSDLPIRFATISGFVVSFI
AFIIMLYALYSRFILQDYVPGWTSLILSVMFIGGIQLIAIGIIGEYISRISSNVRKRPLYIVREKTTTSKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 8e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_679275.1 b-glycosyltransferase, glycosyltransferase family 2 protein VFG0670 Protein 2e-41 41