Gene Information

Name : CHU_2026 (CHU_2026)
Accession : YP_678634.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2359270 - 2360055 bp
Length : 786 bp
Strand : +
Note : -

DNA sequence :
ATGATTGAACACGTTGAAAACCCGGTAGTGGAAATACATGACCTGACGGTAAGTTATTCAAAACGTCCGGTTTTATGGAA
CATTGACCTTACCATACCCAAAGGTGTACTGGCAGGGATCATCGGACCGAATGGTGCCGGTAAATCTACCCTGATCAAAA
CTGCAATGGGTCTGATTCCAAAAGCCAGCGGCTATGTAAAATTATTTGATCAGGATCTGGAATTGATCCGGAAAAAAGTA
AGCTATGTACCGCAGCGCGAATCCGTTGACTGGGACTTTCCGGCTTCGGCACTTGACGTTGTGTTAATGGGCAGGTATGG
ACATGCAGGCATTTTCAAATCACTGCGCCAGGCCGATAAAGAAGTAGCGACCGAGTGCCTGCGTAAAGTAGGTATGGAAG
CTTTTGCAGACAGACAGATTTCTCAGCTTTCAGGCGGGCAGCAGCAGCGTGTTTTCCTTGCGCGCGCACTGGCACAGGAT
GCGGACTTGTATTTTATGGACGAGCCATTTGCCGGTGTGGATGCTTCTACCGAAAAAACGATCATTGCCTTATTAAAAGA
AATGACAGCAAAAGGAAAAACGATCATTGTGGTACATCATGACCTGAACTCTGCCGACGAATATTTTGATTGGATCTTAT
TATTGAATACACGGCTTATTGCCAGCGGACCAACACAAAAAGTATTTACAAAAGAACTGCTTCAGAAAACATACGGCGGC
AAGCTCAACATCCTATCCAGTGTAGGTGACCTGCTGCACAAAGAACAGTTTCCAAACAGAGAATAA

Protein sequence :
MIEHVENPVVEIHDLTVSYSKRPVLWNIDLTIPKGVLAGIIGPNGAGKSTLIKTAMGLIPKASGYVKLFDQDLELIRKKV
SYVPQRESVDWDFPASALDVVLMGRYGHAGIFKSLRQADKEVATECLRKVGMEAFADRQISQLSGGQQQRVFLARALAQD
ADLYFMDEPFAGVDASTEKTIIALLKEMTAKGKTIIVVHHDLNSADEYFDWILLLNTRLIASGPTQKVFTKELLQKTYGG
KLNILSSVGDLLHKEQFPNRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-46 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-46 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHU_2026 YP_678634.1 Mn/Zn ABC transporter ATP-binding protein BAC0400 Protein 3e-69 59