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Name : kdpB (CHU_1983) Accession : YP_678591.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 2315031 - 2317043 bp Length : 2013 bp Strand : + Note : - DNA sequence : ATGACAAAGCCACATACATCGTTGTTTCAAAAAGAGTTGATGCAGGAAGCATTGAAACAATCCTTTATAAAACTCAATCC TAAAATTATGTTCCGAAATCCTGTCATGTTTACAGTAGAGATCGGAACCGCAGTAATGTTTGCTGTATGCCTCTGGATCT TATCCGGAGAAGCATCACAAGGAAGCTTTACATATAACTTTATTGTATTCCTCGTTCTGTTGTTAACCTTGTTATTTGCG AATTTTGCTGAAGCAATCGCCGAAGCACGAGGAAAAGCGCAAGCAGACAGTCTGCGTAAAACAAGGGAAGAAACGCCCAC CAAATTAGTAAGCGGACAAATCATCTCTTCCTCTCAATTAAAAAAAGGTGATGTATTTATATGCGAAGCAGGCGATCTTA TTGCAACGGATGGTGAAATCATTGAAGGTCTTGCAACCATTGATGAAAGCGCCATTACGGGAGAAAGTGCACCTGTGATC CGTGAATCGGGCGGTGATAAAAGCTCTGTTACTGGTGGTACAAAAGTATTATCGGATAAAATAAAAGTACAGGTAACAAC CGAACCCGGAGAAAGCTTCTTGGATAAAATGATTGCTTTGGTTGAAGGTGCGAGCCGACAAAAAACACCAAATGAAATTG CATTGACAATTCTGTTGGCTGGTTTTACGTTGGTATTTATTATTGTGACCATCACATTAAAACCCTTTGCTGATTATGCC AACACCCCAATCACTATTGCCGCATTCATTTCTTTATTTGTTTGTTTGATCCCAACAACTATTGGTGGTTTGCTTTCAGC CATCGGAATTGCAGGCATGGATCGAGCATTGCGCGCCAATGTCATTACCAAGAGTGGTAAAGCAGTTGAAACAGCCGGCG ACATAGACGTTCTGTTGTTAGATAAAACAGGAACCATTACGATTGGCAATAGAAAAGCAACATATTTTTATCCGGGTACA GGTGTTGATGAAAAATATTTCATTACCTGCGCTACACTTAGTTCCATGAGCGACGAAACACCGGAAGGGAAATCCATTAT TGAATTAGCAGGCGTAAATCCGGCAAGTTATAATATTGAAAATCCTCGTTTCATAAAATTCACTGCAGAAACACGATGCT CCGGTATTGATTATGAAAATACGCGCATTCGGAAAGGTGCTGCAGACGCTATCAAACGTTTGGCAGAAAAAGAAGGAAAT GTTTATTCTACAGAAACTACTGAACGTGTAACAGCAATTTCAAGCAATGGCGGAACCCCTTTAGTAATTTCAGTAAACGA AAAAATAATCGGTGTCATTGAATTGCAGGATATCATCAAACCCGGCATACAGGAACGTTTTGAACGCCTTCGAAAAATGG GTATCAAAACAGTTATGGTTACAGGAGATAATCCGTTAACGGCAAAATTCATTGCAGAAAAAGCCGGTGTAGATGATTTT ATTGCGGAGGCAAAACCGGAAGATAAAATGAACTACATCAAAAAAGAACAATCGGAAGGCAGATTGGTAGCCATGATGGG GGACGGAACAAACGATGCTCCTGCCCTTGCACAAGCAGATGTAGGCGTGGCGATGAACAGCGGAACGCAGGCAGCGAAAG AAGCCGGCAACATGGTTGACTTAGATAATGATCCAACCAAACTGATTGAGATCGTTGAGATCGGAAAGCAATTATTAATG ACACGGGGAACCTTAACAACCTTCAGTATTGCGAATGATGTAGCCAAATATTTTGCCATCATTCCGGCACTGTTTATTGT AGGCATACCTTCGTTACAAAGTTTGAATATTATGAAGTTGCATAGTCCGGAAAGTGCGATACTTTCAGCGGTTATCTTTA ATGCCATTATTATTCCATTTCTGATTCCACTGGCATTAAAAGGTGTTGCATACAAACCCATTGGTGCTAGTGCACTGCTC CGCCGAAACCTATTGATCTATGGCTTAGGTGGTGTGATCATACCATTCATAGGTATTAAAGCAATTGATCTTATTGTTTC TTTATTCATTTAA Protein sequence : MTKPHTSLFQKELMQEALKQSFIKLNPKIMFRNPVMFTVEIGTAVMFAVCLWILSGEASQGSFTYNFIVFLVLLLTLLFA NFAEAIAEARGKAQADSLRKTREETPTKLVSGQIISSSQLKKGDVFICEAGDLIATDGEIIEGLATIDESAITGESAPVI RESGGDKSSVTGGTKVLSDKIKVQVTTEPGESFLDKMIALVEGASRQKTPNEIALTILLAGFTLVFIIVTITLKPFADYA NTPITIAAFISLFVCLIPTTIGGLLSAIGIAGMDRALRANVITKSGKAVETAGDIDVLLLDKTGTITIGNRKATYFYPGT GVDEKYFITCATLSSMSDETPEGKSIIELAGVNPASYNIENPRFIKFTAETRCSGIDYENTRIRKGAADAIKRLAEKEGN VYSTETTERVTAISSNGGTPLVISVNEKIIGVIELQDIIKPGIQERFERLRKMGIKTVMVTGDNPLTAKFIAEKAGVDDF IAEAKPEDKMNYIKKEQSEGRLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDNDPTKLIEIVEIGKQLLM TRGTLTTFSIANDVAKYFAIIPALFIVGIPSLQSLNIMKLHSPESAILSAVIFNAIIIPFLIPLALKGVAYKPIGASALL RRNLLIYGLGGVIIPFIGIKAIDLIVSLFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-140 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-140 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-140 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-140 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-140 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-141 | 56 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 9e-145 | 56 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-145 | 56 |
