Gene Information

Name : CHU_1516 (CHU_1516)
Accession : YP_678127.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Resistance
Product : arsenite efflux transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1750527 - 1751579 bp
Length : 1053 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACTCTAATCCTGCACAACGAAAGAAATTAGGTTTCTTAGATCGTTACTTGACGTTATGGATTTTCCTAGCAAT
GGCAATAGGAGTAGGGATAGGATATTTTATACCTAATACTCCATCATTGATAAACTCTTTTCAATCTGGCACAACAAATA
TTCCTATTGCAATAGGATTAATTGTTATGATGTATCCTCCCTTGGCGAAAGTAAAATATGAAGAGATTGATAATATATTC
GACAATGTAAAAGTATTGTCGTTGTCTCTTTTTATAAACTGGATTGTTGGACCTTTATTAATGTTTGTACTTGCTATTAC
GTTTCTCTCGGATTATCCGGAGTATATGGTAGGTTTAATATTAATCGGTATTGCCCGATGCATTGCCATGGTTATTGTTT
GGAATGAGCTGGCTGATGGAAATAGAGAATATGCAGCAGGTTTGGTTGCATTGAATAGTATCTTTCAGGTACTGTTTTAT
AGTGTGTTGGCATGGCTTTATATTACAGTACTTCCGCCATATTTCGGCATAAAGGGAATTGAAATTAATATTGGTTTTCT
GGAAATTGCAGTGAGCGTATTTATCTATCTCGGAAATCCTTTATTAGCAGGATTTGTTTCCAGATATGTATTGATAAAAG
TAAAAGGAAAAGACTGGTACGAACAAAAATATCTTCCGTTCATAAGTACGATTACCTTAATTGCATTATTATTTACAATT
GTAGTTATGTTTAGTTTGAAAGGAGAGTTGATTGTCCAGCTACCAATGGATGTTTTAAGGATTGCTATTCCTTTAACGAT
TTATTTTGCTCTAATGTTTATTGGAACATTTATAGCTGGGAAGTACATTGGTGCCGATTATTCTAAAAATGTAGCACTTT
CATTTACCGCAGCCGGAAATAACTTTGAACTGGCTATTGCCGTTGCTATCGCTATTTTTGGAATAAATTCAGGGCCGGCA
TTTACAGGAGTGATTGGGCCGTTGGTTGAAGTGCCAGCTTTGATATTGTTAGTGAAGGTGGCATTTTGGCTAAAGAAAAA
ATTATATAGATAA

Protein sequence :
MNNSNPAQRKKLGFLDRYLTLWIFLAMAIGVGIGYFIPNTPSLINSFQSGTTNIPIAIGLIVMMYPPLAKVKYEEIDNIF
DNVKVLSLSLFINWIVGPLLMFVLAITFLSDYPEYMVGLILIGIARCIAMVIVWNELADGNREYAAGLVALNSIFQVLFY
SVLAWLYITVLPPYFGIKGIEINIGFLEIAVSVFIYLGNPLLAGFVSRYVLIKVKGKDWYEQKYLPFISTITLIALLFTI
VVMFSLKGELIVQLPMDVLRIAIPLTIYFALMFIGTFIAGKYIGADYSKNVALSFTAAGNNFELAIAVAIAIFGINSGPA
FTGVIGPLVEVPALILLVKVAFWLKKKLYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-82 61
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-102 61
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-102 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CHU_1516 YP_678127.1 arsenite efflux transporter BAC0573 Protein 1e-105 64
CHU_1516 YP_678127.1 arsenite efflux transporter BAC0004 Protein 2e-79 52