Gene Information

Name : Meso_0894 (Meso_0894)
Accession : YP_673456.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 984408 - 985076 bp
Length : 669 bp
Strand : +
Note : PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mlr7684 two-component system, regulatory protein

DNA sequence :
ATGCGCATTCTGGTTGTCGAGGACGACAAAGACCTGAACCGGCAGATTAGCGTCGCGCTGGAAGATGCCGGTTACGTGGT
CGATCGCGCCTTTGACGGCGAAGAGGGCCATTTCCTAGGCGATACCGAACCATACGACGCGATCGTGCTCGATATCGGCC
TGCCGCAGATGGATGGGATCAGCGTGCTGGAACGTTGGCGGCGCGATGGGCGCAAGATGCCCGTTCTGATCCTGACCGCG
CGCGACCGCTGGAGCGATAAGGTGGCCGGCATCGATGCCGGCGCGGACGACTACGTGACCAAGCCCTTCCATATGGAGGA
GGTGCTGGCGCGCGTGCGGGCGCTCATCCGCCGCGCAGCGGGACATGCATCCTCCGAGCTTTACTGCGGACCTTTGCGGC
TGGACACCAAGGCGTCCAAGGCGGACATGGATGGCGTGCCGCTGAAGCTCACCTCCCACGAATACCGGATGCTTGCTTAC
CTGATGCATCACAAAGGTTCCGTGGTTTCGCGAACGGAGCTGGTGGAGCATCTTTACGATCAGGACTTCGACCGCGATTC
CAATACGATCGAGGTTTTCGTCGGGCGCCTGCGCAAGAAGCTGGGCGTGGACCTGATAGAAACTGTGCGAGGCATGGGAT
ACCGTATGCGCGAGCCGAATGACGGATGA

Protein sequence :
MRILVVEDDKDLNRQISVALEDAGYVVDRAFDGEEGHFLGDTEPYDAIVLDIGLPQMDGISVLERWRRDGRKMPVLILTA
RDRWSDKVAGIDAGADDYVTKPFHMEEVLARVRALIRRAAGHASSELYCGPLRLDTKASKADMDGVPLKLTSHEYRMLAY
LMHHKGSVVSRTELVEHLYDQDFDRDSNTIEVFVGRLRKKLGVDLIETVRGMGYRMREPNDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0894 YP_673456.1 two component transcriptional regulator CP004022.1.gene1005. Protein 3e-38 47
Meso_0894 YP_673456.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-37 47
Meso_0894 YP_673456.1 two component transcriptional regulator CP000647.1.gene1136. Protein 1e-35 46
Meso_0894 YP_673456.1 two component transcriptional regulator BAC0530 Protein 8e-36 46
Meso_0894 YP_673456.1 two component transcriptional regulator CP000034.1.gene2022. Protein 5e-35 45
Meso_0894 YP_673456.1 two component transcriptional regulator NC_002695.1.913289.p Protein 2e-34 45
Meso_0894 YP_673456.1 two component transcriptional regulator CP001918.1.gene2526. Protein 3e-34 45
Meso_0894 YP_673456.1 two component transcriptional regulator CP001138.1.gene1939. Protein 4e-35 45
Meso_0894 YP_673456.1 two component transcriptional regulator BAC0487 Protein 5e-28 43
Meso_0894 YP_673456.1 two component transcriptional regulator BAC0197 Protein 1e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0894 YP_673456.1 two component transcriptional regulator VFG0475 Protein 4e-35 45
Meso_0894 YP_673456.1 two component transcriptional regulator VFG0473 Protein 4e-28 42
Meso_0894 YP_673456.1 two component transcriptional regulator VFG1389 Protein 1e-26 42
Meso_0894 YP_673456.1 two component transcriptional regulator VFG1390 Protein 1e-25 41