Gene Information

Name : Meso_0560 (Meso_0560)
Accession : YP_673127.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 618177 - 619805 bp
Length : 1629 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: bja:bll1209 ABC transporter ATP-binding protein

DNA sequence :
GTGCTCGAGATAGAAAAGCTTAGCATCGTTCTTCCTTCCGGCGCCGACAGGGCTCTCGCGATTAAGGACGTTTCGTTCAG
CGTGAAGTCCGGTTCAACGCTTTGTCTTGTGGGCGAATCCGGGTCGGGGAAATCGGTTATCGGACAAGCCGTTGCAGGGC
TCCTACCGCAAACCCTTCACTGTTTGAAACAGAGTTCCATACGCCTTGGCGGCCGAAACTTGCTGTCGCTAGACGAATGT
GCGTGGCGCCGTATTCGAGGGCGGGAAATCGGAATGGTGTTTCAGGAGCCGATGACTGCCTTGAATCCGCTGATGCCAGT
CGGGCAGCAGATTGCTGAAGTTTACCGGTCACACGGCTTGCGCCTCAGGAAGGCGGAAGTCCGGGACCGGGTTGAAGGTT
TGCTCGAGCGTGTCGGGATAAAGGACCCGGCCCGCATCTCGAAATCCTACACGTTCCGCATGTCAGGCGGTCAGAGGCAG
CGTGCTATGATAGCCATGGCCGTGGCAATGAAGCCCAAGGTGCTTATTGCCGATGAGCCGACCACAGCGCTCGATGTGAC
GACGCAAAGACAGGTTCTTGACTTGTTGGCCGACTTTCAGGCTGAAACCCGAATGGCACTCATATTCATCACGCATGATT
TTGGGATCGTGGCGGATATTGCCGACGAAGTCGCTGTCATGGAAAGCGGAAACCTTGTCGAGTTCGGCTCGAAGGAAGAT
GTTTTGGCTCGCGCGCAGCACCGCTACACTCGAAAATTGCTCGCAGCTGTTCCGCGCCTTCATGAGCATAAGGCTTCGGT
TGCCGAGCGATCGACACCGGTGCTCGAAGTGCGCGGCTTGAGCAAAACGTATGGAGTGGCAACGAGCATCTTCAGAAGGC
AGGACATGAGGGTCCTGAACGATGTCAATTTCAAGGTTTGCAAAGGCGAGGTTGTCGCGCTTGTAGGGGAGTCCGGATCC
GGCAAATCAACAATTGCAAAATGCCTGACGCGTCTCACGTCGATAGACACCGGTTCGATCCGTCTTGACGGGGCAGATAT
GCTGAGCCTCAAAGGAGAGGCCCTAATGAAACTGCGCCGCAAGGTGCAGATCGTATTCCAAGATCCGTACGGATCTCTGA
ATCCTCGCCAGAAGATCGTGGATGCGGTATCGGCCGGACCAATTGCGCAGGGGGTTGCGTCACGCGAAGCCCGTGAACTC
GCGGAGCACCTGCTCACGATTGTCGGTCTGGGACGAAATGCACTCGACCGTTATCCTCATGAGTTCTCCGGCGGGCAACG
TCAGCGCATTGGTATCGCCAGGGCTCTCGCCGCGAAGCCGGAGGTTCTTATTGCGGACGAAGCTGTCTCTGCTCTCGATG
TTACGGTTCAAGCGCAGATTTTGCGACTTCTTGCGGACCTAAGGGATCGACTTGGACTCACCATGCTTTTTATCACGCAC
GACCTGCGCGTCGCCGGTCAAGTGAGCGATCGCATAATCGTCTTGAAGGCTGGGAATGTAGTTGAAGAGGGTCCCACTCA
AGCAATATTCACCAAGCCATCAAATCAGTACACTTACTCTCTTCTGCAGGCAATTCCCGGAATCTCATCAAACGAGTCCG
CGTTGGTTCGGAATAAGTGCGTGTGCTAA

Protein sequence :
MLEIEKLSIVLPSGADRALAIKDVSFSVKSGSTLCLVGESGSGKSVIGQAVAGLLPQTLHCLKQSSIRLGGRNLLSLDEC
AWRRIRGREIGMVFQEPMTALNPLMPVGQQIAEVYRSHGLRLRKAEVRDRVEGLLERVGIKDPARISKSYTFRMSGGQRQ
RAMIAMAVAMKPKVLIADEPTTALDVTTQRQVLDLLADFQAETRMALIFITHDFGIVADIADEVAVMESGNLVEFGSKED
VLARAQHRYTRKLLAAVPRLHEHKASVAERSTPVLEVRGLSKTYGVATSIFRRQDMRVLNDVNFKVCKGEVVALVGESGS
GKSTIAKCLTRLTSIDTGSIRLDGADMLSLKGEALMKLRRKVQIVFQDPYGSLNPRQKIVDAVSAGPIAQGVASREAREL
AEHLLTIVGLGRNALDRYPHEFSGGQRQRIGIARALAAKPEVLIADEAVSALDVTVQAQILRLLADLRDRLGLTMLFITH
DLRVAGQVSDRIIVLKAGNVVEEGPTQAIFTKPSNQYTYSLLQAIPGISSNESALVRNKCVC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-77 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-77 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-77 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-77 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-87 41