Gene Information

Name : Meso_4080 (Meso_4080)
Accession : YP_676612.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4388978 - 4390606 bp
Length : 1629 bp
Strand : -
Note : PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: mlo:mll5490 peptide ABC transporter, ATP-binding protein

DNA sequence :
ATGAGCGCACCCCTCCTCTCGATACGCGACCTCTCGGTTGCCTTCACGCAGGGCGGGCAGGAATCCCTTGCCGTCGATCA
CGTCTCCTTCGATATCCAGCAGGGCGAGACCGTGGCTCTTGTGGGCGAGTCGGGCTCCGGCAAGTCCGTGACGGCCCTTT
CGGTACTGAAGCTCCTGCCCTATCCATCGGCAAGCCACCCTTCCGGACAGGTTCTCTATCAGGGGCAGGACCTGCTCGAC
AGCGACGAGCGCGACCTGCGCCGGGTGCGCGGCAACGAAATCAGCATGATCTTTCAGGAGCCGATGACCTCGCTCAACCC
GCTCCACAGCATTGAGCGGCAGGTGGGCGAGGTGCTGAAGCTCCATCGCGGGTTGGGCGAAAAGGCAGCGCGGGAGCGCA
CGCTTGAGCTTTTGAACCAGGTGGGCATCCGCGATCCGGAAAAGCGGCTGGACGCCTTTCCCCACCAGCTTTCCGGCGGG
CAACGCCAGCGTGTGATGATCGCCATGGCGCTCGCCTGCGAGCCGAAGCTGCTGATTGCCGATGAGCCAACGACGGCGCT
CGACGTCACGGTGCAGGCGCAAATTCTGGAACTGCTCGCAAGGCTGAAGCGCGAGCAGAACCTTTCCATGCTCTTCATCA
CCCATGATCTCGGGATCGTGCGCAAGGTGGCGGACCGGGTCTGCGTGATGACCAGGGGCAAGATTGTTGAGAGCGGCCCG
ACGGCGCAGATCTTCTCCGATCCGAAGCACGAATATACCCGGCACCTCTTGGCCGCCGAGCCGAAGGGTGAGCCGCCGAG
GGCCGATCTTTCGGCCGAGAAGGTGATGGTGGGGAAAGACGTAAAGGTCTGGTTCCCGATCAAGAAGGGCTTCATGAGGC
GGGTGGTCGACCACATAAAGGCGGTCGACGGGGTTGATGTCACCGTCAGGGCCGGCCAGACGCTGGGCGTCGTCGGCGAA
TCCGGCTCGGGCAAGACTACGCTCGGGCTTGCGCTCTCGCGCATGATCTCCTCAGAAGGCGAGATCCGCTTTAAAGGCGA
GCGAATAGACGGACGGTCGTTTCGCGAGATGCGGCCTTTGCGGCGGCAGATGCAGATCGTCTTCCAGGATCCTTTCGGGT
CTTTGAGTCCCCGCATGTCGGTGGCGGAGATCATTCAGGAAGGCTTGAGGGTGCATGAGCCCAGGCTTTCCCTTGAAGAG
CGCGACGCGCAGGTGGTCGCCGTACTCAAGGAAGTCGGGCTCGACCCGGAGGCGCGTTTCCGCTACCCGCACGAGTTCTC
GGGCGGCCAGCGGCAGCGCATCGCAATTGCGCGGGCGATGGTGCTCAAGCCCAACTTCGTGATGCTGGACGAGCCGACCT
CCGCGCTCGACATGAGCGTGCAGGCGCAGGTGGTGGATTTGTTGCGCGACCTGCAGAAGCGGCACAACCTCGCCTATCTC
TTCATCAGCCACGACCTGAAGGTGGTGCGCGCGCTCGCCAACGAGGTGATCGTGATGCGCAACGGCAAGGTGGTCGAGAC
CGGCACCGCGGACCAGATCTTCCACACGCCAAAAACCGACTACACCAAAGCACTGATCGCCGCCGCCTTCGACATTGCGA
CGGCTCCCACAGGTGTCGTCAGCGATTAG

Protein sequence :
MSAPLLSIRDLSVAFTQGGQESLAVDHVSFDIQQGETVALVGESGSGKSVTALSVLKLLPYPSASHPSGQVLYQGQDLLD
SDERDLRRVRGNEISMIFQEPMTSLNPLHSIERQVGEVLKLHRGLGEKAARERTLELLNQVGIRDPEKRLDAFPHQLSGG
QRQRVMIAMALACEPKLLIADEPTTALDVTVQAQILELLARLKREQNLSMLFITHDLGIVRKVADRVCVMTRGKIVESGP
TAQIFSDPKHEYTRHLLAAEPKGEPPRADLSAEKVMVGKDVKVWFPIKKGFMRRVVDHIKAVDGVDVTVRAGQTLGVVGE
SGSGKTTLGLALSRMISSEGEIRFKGERIDGRSFREMRPLRRQMQIVFQDPFGSLSPRMSVAEIIQEGLRVHEPRLSLEE
RDAQVVAVLKEVGLDPEARFRYPHEFSGGQRQRIAIARAMVLKPNFVMLDEPTSALDMSVQAQVVDLLRDLQKRHNLAYL
FISHDLKVVRALANEVIVMRNGKVVETGTADQIFHTPKTDYTKALIAAAFDIATAPTGVVSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-84 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-95 43