Gene Information

Name : rph (Meso_4016)
Accession : YP_676548.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4320930 - 4321646 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGACCATCAAGACGGCAACCGGACGAGATGCGCGCAATCAGCTTCGAGCGTGGTGTATCGAAACATGCCGAGGGCTC
CTGCCTCGTGAGGTTCGGTGACACCCACGTATTGTGCACGGCAAGCCTGGAGGAGAAGGTTCCCGCCTGGTTGCGGAACT
CCGGGAAGGGCTGGGTGACGGCCGAGTATGGCATGCTTCCACGCTCAACCGGAGAACGAATGCGCAGGGAGGCGGCGAGC
GGCAAGCAGGGCGGGCGCACGCTAGAGATCCAGCGCCTGGTCGGCCGCAGCCTGCGTTCAGTCATCGACCTTGAAGCACT
CGGAGAAATGCAGATCACCGTCGACTGCGACGTCCTGCAAGCCGATGGCGGCACGCGCACAGCGGCGATCACAGGCGGGT
TCGTGGCGCTGCACGACTGCCTAAGCTGGATGCAGGCGCGCCAAATGGTCACCGTAGAGCGCGTTTTGAAGGACCATGTC
GCGGCGATCTCCTGCGGAATATACGACGGCACGCCTGTGCTCGACCTCGACTACGCGGAGGATTCAGCAGCCGAAACCGA
CGCGAATTTCGTAATGACCGGCAAGGGCGGCATCGTGGAGATCCAGGGGACCGCCGAAGGCGCGCCTTTCACGGAAGAGG
AATTTCATGAACTTCTTCGCCTGGCCAGGAAAGGTATCTTCCGGCTGGTGGAGCTGCAGAAGATGGCGGTCTCGTAA

Protein sequence :
MRPSRRQPDEMRAISFERGVSKHAEGSCLVRFGDTHVLCTASLEEKVPAWLRNSGKGWVTAEYGMLPRSTGERMRREAAS
GKQGGRTLEIQRLVGRSLRSVIDLEALGEMQITVDCDVLQADGGTRTAAITGGFVALHDCLSWMQARQMVTVERVLKDHV
AAISCGIYDGTPVLDLDYAEDSAAETDANFVMTGKGGIVEIQGTAEGAPFTEEEFHELLRLARKGIFRLVELQKMAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-53 54