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Name : Meso_3944 (Meso_3944) Accession : YP_676476.1 Strain : Chelativorans sp. BNC1 Genome accession: NC_008254 Putative virulence/resistance : Resistance Product : Bcr/CflA subfamily drug resistance transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 4247016 - 4248221 bp Length : 1206 bp Strand : - Note : TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00744 putative transport protein transmembrane DNA sequence : ATGTCCAGAAATATCCGGCTGTGGACCTACAGCCTGCCTGTCGCATTGATGCTGCTGGCACCCTTCAACATCCTTGCCTC GCTTGGCATGGACATTTACCTGCCTGCCATTCCCGCAATGCCAGGAATCCTCGGCACCACACCCAATGTGGTGCAACTAA CGCTCACCCTCTACATGATTATGCTCGGGGTAGGACAGATCCTCTTCGGGCCTCTTTCGGACCGTCTCGGCCGCAGGCCC GTCCTGATCGGCGGGGCGATCCTCTTCGCCACTGCTTCCTTTGCTCTTGCGGCCACATCCTCGGCCGGGCTGTTCCTGCT TCTCCGGTTGGCTCAGGCCACGGGCGCGGCTGCGGTGCTGGTTGCCCTTTTCGCCACCATCCGCGACGTCTATGCCGAGC GTCCAGAAAGCGCCGTCATATACAGCCTCATGAATGCCATGCTGGCATTCGTGCCTGCGGTCGGTCCCATCGCCGGCGCG CTGATCATGGGGATCTGGGGATGGCGCGCCATCTTCCTTGCGCTGGGCATTCCGGCGCTCATCGTGCTCACCCTCATGCT TCCCGCCTGGCACGAGACCCGGCAGGCGAAGGGAGGACAGGATAGCGCGGGTTTTAGGCCGGTGCTCAGAAGCCCAGCCT TTTGGACCTATACCATCGGCTTCGGAACTGCCATGGGCACATTCTTCGTGTTCTTCTCTACCGCCCCTCGCGTTCTGATC GATGGAGCAGGCTTTTCCGAGCTCGATTTCAGCTTCGCTTTTGCAAGCGTGGCCATCGCCATGATTATTACCACGCGGTT CGCCAAGAGCTTCGTGGCGCGATGGGGAATTCCGGGCACCCTGATGCGCGGCATGGTGATGTTGATCCTGGGGGCGTTCC TGCTCGCGATCGGCCAGTTGTTCCTCGCCCCGTCCTTTTGGTCCCTTGTCGTGCCCATGTGGCTGATTGCGATCGGCATC GTCTTTACGACCGCCGTCACCGCTAATGGCGCATTGCAGGAGTTCGGAGAAACTGCGGGAATGGCGGTCGCCCTGCATTT CTGTATCCAGAGCCTCCTTGTCGGCATTGTCGGCACGGGATTTGTGATCATGCTGGATGGCAGCACCGCATGGCCTCTGA TCACCAACGCGGCCGGCATGGCGGCGGTCACTTTGATCGCGCTCTTTTGGCTCGGCGGCCGCAATTTGCATCCGCAAACC GCGTGA Protein sequence : MSRNIRLWTYSLPVALMLLAPFNILASLGMDIYLPAIPAMPGILGTTPNVVQLTLTLYMIMLGVGQILFGPLSDRLGRRP VLIGGAILFATASFALAATSSAGLFLLLRLAQATGAAAVLVALFATIRDVYAERPESAVIYSLMNAMLAFVPAVGPIAGA LIMGIWGWRAIFLALGIPALIVLTLMLPAWHETRQAKGGQDSAGFRPVLRSPAFWTYTIGFGTAMGTFFVFFSTAPRVLI DGAGFSELDFSFAFASVAIAMIITTRFAKSFVARWGIPGTLMRGMVMLILGAFLLAIGQLFLAPSFWSLVVPMWLIAIGI VFTTAVTANGALQEFGETAGMAVALHFCIQSLLVGIVGTGFVIMLDGSTAWPLITNAAGMAAVTLIALFWLGGRNLHPQT A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 4e-95 | 61 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-97 | 59 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-97 | 59 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-97 | 59 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 1e-100 | 59 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 1e-100 | 59 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 1e-69 | 49 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 2e-69 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Meso_3944 | YP_676476.1 | Bcr/CflA subfamily drug resistance transporter | AF294653.1.gene4.p01 | Protein | 2e-69 | 49 |
| Meso_3944 | YP_676476.1 | Bcr/CflA subfamily drug resistance transporter | DQ984668.gene.p01 | Protein | 8e-70 | 49 |
| Meso_3944 | YP_676476.1 | Bcr/CflA subfamily drug resistance transporter | AF156486.gene.p01 | Protein | 8e-69 | 49 |
| Meso_3944 | YP_676476.1 | Bcr/CflA subfamily drug resistance transporter | DQ522237.1.gene4.p01 | Protein | 8e-70 | 49 |
| Meso_3944 | YP_676476.1 | Bcr/CflA subfamily drug resistance transporter | NC_010410.6003586.p0 | Protein | 8e-70 | 49 |
