Gene Information

Name : Meso_3876 (Meso_3876)
Accession : YP_676408.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 4174509 - 4176620 bp
Length : 2112 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC copper-translocating P-type ATPase heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: tbd:Tbd_2740 heavy metal tra

DNA sequence :
ATGAGTTCACCCCATTCCCACCACGGCCATCAGAACCATCAGACCCACGCGACCGGGCATAGAGGTGGCGACGATTACTA
TGGCGATCCCAAAATCGTAGCGGCTGCCGGCTCGAGCCATTCCGGACATGGCGGTCATGGCGGCCACGACCATGGTGCGA
TGGTCGCCGATTTCCGCCGCCGCTTCTGGGTCACGCTGGTCCTGACGCCTCCGGTCCTGCTGCTCTCGCCGATGATCCAG
CACTGGCTCGGCCTCGCCGAAGCGCTGGCCTTTCCCGGCGACCGCTACGTTCTCTTCGTGCTCTCGACCATCGCCTATCT
CTACGGCGGCTGGCCGTTCCTGACCGGCTTCACCTCCGAGTTGCGCAAGCTCCAGCCCGGCATGATGACGCTGATCGCAT
TGGCGATCTCGGCGGCGTACTTCTTTTCGGCCGCCGTCACCTTCGGTCTCCCCGGCCAGGAGTTCTACTGGGAGCTGGTG
ACGCTGATCGCCATCATGCTGCTGGGCCACTGGGTCGAGATGCGCTCGGTGATGGGCGCCTCGCGCGCCCTGGAAGAGCT
CGTCCGACTGCTTCCCGACAGCGCGACGAGGATCGACGCGGACGGCACCACGCACGAGGTCGCGATCTCGGCGCTGCAGC
CCGGCGACCGCGTGCTGGTGCGGCCGGGCGCCAAGGTGCCCGTCGACGGAGAGATCGTCGAAGGATCGTCGGGCTTCAAC
GAAGCGATGCTGACCGGGGAATCCCGGCCGGTCTCCAAGACCGTGGGCGCGACCGCCATCGGCGGCGCGATCAACGGCGC
CAATGCCGTGACCATCCAGGTGACCGCCACCGGCGACGCCACCTATCTGGCGCAGGTCATCGACCTCGTCAAAAAGGCGC
AGGCCACGCGATCCCGCACCCAGGACCTCGCGAACCGCGCCGCCTCATGGCTGACCTACATCGCGCTTGTCGTCGGCTTC
GGTACGCTCGTCGTCTGGTGGCTGGTGCTGGGTGCGCCGTTCGAATTCGCGATGGAGCGCATGGTGACGGTGATGGTCGT
CGCCTGTCCGCACGCGCTCGGCCTCGCCGTTCCGCTCGTCGTAGCGGTGAGCACGTCGCTGTCGGCCGGCAACGGCCTGC
TGATCCGTGACCGCGCCGCCTTCGAGCGAGCGCGCAATCTCAACGCCGCCGTCTTCGACAAGACCGGCACGCTGACCGAG
GGTCGCTTCGGGGTCAGCGACATCGTGCTGCTGGCCGGTGGCGACGAGAACGAGGAACTGGCCTATGCGGCCGCGGCCGA
AAGCCAGTCCGAGCACCCCATCGCCCACGGCATCGTCGCCGAGGCGAAGGACCGGAGCCTGACCGTTCCCAGGGCGAGCG
AGGTCAGCAACATCACCGGCGAAGGCATCGTGGCAAAGGTCGGCGGCAAGGATTTGCGCATCGTCAGCCCCGGTTATCTG
GCACGGCAAGGCACGCCGGTCGGTCACGAGCGGCTCAAGCAGCTTGAATCGCAGGGCAAGACCGTGGTCGTCCTCGTGCG
CGACGGCGAACCGCGTGCGCTCTTCGCGCTGGCCGACATCATCCGTCCGGAATCGAAGGAAGCCATCGCCGAACTCAAGT
CCCTCGGGATCAGCTCCATCATGCTCACCGGCGATGCCGAGGGCGTTGCAAAGGCGGTATCGGAAGAACTCGGCATCACC
GAGTATTTCGCCGAGGTGCTGCCCGATCAGAAATCGCAGAAGATCGAGGAACTGCAAGCGCGCGGGCTCTCGGTCGCAAT
GGTCGGGGACGGGGTGAACGATGCCCCCGCGCTGGTGGTGGCCGATCTCGGGATCGCCATCGGCGCGGGCACCGACGTGG
CCGTCGAATCCGCCGATGTGGTGCTGGTCAGGAGCGACCCGCGCGACGTGGGCGCGATCCTTGGCCTCTCGCGCGCCACC
TACCGCAAGATGGTGCAGAACCTGATCTGGGCGACGGGCTACAACGCGATCGCCATCCCGATGGCGGCCGGCATCACCTT
CGGAACCGGCTTCATGATGACGCCGGCCGTGGCCGCCGTCTTCATGTCGGCCAGCACCGTCATCGTCGCCATCAACGCCC
AGTTCCTGCGCTCCTACAGGCGGCACAAATGA

Protein sequence :
MSSPHSHHGHQNHQTHATGHRGGDDYYGDPKIVAAAGSSHSGHGGHGGHDHGAMVADFRRRFWVTLVLTPPVLLLSPMIQ
HWLGLAEALAFPGDRYVLFVLSTIAYLYGGWPFLTGFTSELRKLQPGMMTLIALAISAAYFFSAAVTFGLPGQEFYWELV
TLIAIMLLGHWVEMRSVMGASRALEELVRLLPDSATRIDADGTTHEVAISALQPGDRVLVRPGAKVPVDGEIVEGSSGFN
EAMLTGESRPVSKTVGATAIGGAINGANAVTIQVTATGDATYLAQVIDLVKKAQATRSRTQDLANRAASWLTYIALVVGF
GTLVVWWLVLGAPFEFAMERMVTVMVVACPHALGLAVPLVVAVSTSLSAGNGLLIRDRAAFERARNLNAAVFDKTGTLTE
GRFGVSDIVLLAGGDENEELAYAAAAESQSEHPIAHGIVAEAKDRSLTVPRASEVSNITGEGIVAKVGGKDLRIVSPGYL
ARQGTPVGHERLKQLESQGKTVVVLVRDGEPRALFALADIIRPESKEAIAELKSLGISSIMLTGDAEGVAKAVSEELGIT
EYFAEVLPDQKSQKIEELQARGLSVAMVGDGVNDAPALVVADLGIAIGAGTDVAVESADVVLVRSDPRDVGAILGLSRAT
YRKMVQNLIWATGYNAIAIPMAAGITFGTGFMMTPAVAAVFMSASTVIVAINAQFLRSYRRHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-83 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_3876 YP_676408.1 heavy metal translocating P-type ATPase BAC0629 Protein 2e-157 60
Meso_3876 YP_676408.1 heavy metal translocating P-type ATPase BAC0079 Protein 3e-119 47
Meso_3876 YP_676408.1 heavy metal translocating P-type ATPase BAC0383 Protein 8e-93 42