Gene Information

Name : deoA (Meso_3657)
Accession : YP_676190.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 3948455 - 3949771 bp
Length : 1317 bp
Strand : +
Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate

DNA sequence :
ATGCCGCTCCCCCAGGAAATCATCCGCAGGAAACGCGACGGCAAGGCTCTGTCGCCGGCCGATATCGCTGATTTTGCGGC
CGGTCTTGCCTCCGGCGCCTGGAGCGAAGGGCAGGTGGCCGCCCTCGCCATGGCGGTCCTGCTCAACGGCATGGAGCGCG
ATGAAACCGTCGCGCTCACTCTTGCAATGCGCGATTCCGGCGACGTGCTCGACTGGTTGTCACTTCCCGCCCCGGTCACC
GACAAGCATTCCACGGGCGGCGTGGGCGATAATGTCTCGCTGATGCTGGCGCCCATCGTCGCCGCCTGCGGCGCCTATGT
GCCCATGATATCGGGGCGCGGGCTCGGGCATACGGGCGGCACGCTCGACAAGATGGACTCCATTCCCGGCTATCGCAGCC
AGCCGACGCGGGAAGAGTTCGAGCGAACCGTGCGCGCCGCCGGCTGCGCCATCATCGGCCAGACGGGAGACCTTGCGCCC
GCGGACCGCCGCTTCTACGCCATCAGAGACGTGACCGGCACGGTGGAATCCATCCCTCTCATCACGGCGTCGATTCTTTC
CAAAAAACTTGCCGCCGGCCTGCAGTCGTTGGTCCTCGACGTAAAATCGGGCAACGGCGCCTTCATGGCCGAGAGGAGCG
AGGCTCAGGCGCTCGCGACCAGCCTCGTGCAGGTGGCGCAGGGCGCGGGGCTATCTGCCAGCGCGCTTATCACGGACATG
AACGAGCCGCTCGCCACGGCCGCGGGCAATGCTGTCGAGGTGCGAAACGCCGTCGATTTTCTCACGGGAGAAACACGGGA
TGAGCGCCTTGAGGAGGTGACGCTGGCGCTGGCGGCCGAGATGCTCGTAGCCACGGGCATCGCATCCGGTGGGGAGAATG
CGTTGAAACGCGCCCGCACGGCGCTCGAAAGCGGCGGTGCGGCCGAGCGCTTTAGCCGGATGGTCGCCGCGCTTGGCGGC
CCCGCCGATTTCGTTGAGAAGATGGACCAATATCTCCCTCGCGCGCCCGAAACGCGTGCTGTGAAAGCCGAGCGGGCGGG
ATTCGTCGCCAGCATAGACACGCGGGCGCTGGGAATTGTCGTGGTCGAACTCGGCGGCGGCCGGCGCAGGCCGGAAGATC
CAATCGACCACGCCGTCGGCCTCACAGCCACATTGCCCATCGGCAGGGAAGTCCGCCGCGACGATCCGCTGGCCGTGGTC
CATGCCCGCACGCCCGCCGATGCCGAACGGGCAGCCGAAGCGGTCCGCCGCGCCTACCGCATCGCCGATGAGCGGCTTTC
CACGCAATCGCCTGTGCTGGAGAAGATCGCGGGCTGA

Protein sequence :
MPLPQEIIRRKRDGKALSPADIADFAAGLASGAWSEGQVAALAMAVLLNGMERDETVALTLAMRDSGDVLDWLSLPAPVT
DKHSTGGVGDNVSLMLAPIVAACGAYVPMISGRGLGHTGGTLDKMDSIPGYRSQPTREEFERTVRAAGCAIIGQTGDLAP
ADRRFYAIRDVTGTVESIPLITASILSKKLAAGLQSLVLDVKSGNGAFMAERSEAQALATSLVQVAQGAGLSASALITDM
NEPLATAAGNAVEVRNAVDFLTGETRDERLEEVTLALAAEMLVATGIASGGENALKRARTALESGGAAERFSRMVAALGG
PADFVEKMDQYLPRAPETRAVKAERAGFVASIDTRALGIVVVELGGGRRRPEDPIDHAVGLTATLPIGREVRRDDPLAVV
HARTPADAERAAEAVRRAYRIADERLSTQSPVLEKIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 5e-64 42