Gene Information

Name : Meso_0035 (Meso_0035)
Accession : YP_672605.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 42214 - 43845 bp
Length : 1632 bp
Strand : -
Note : PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: mlo:mlr7600 ABC transporter, ATP-binding protein

DNA sequence :
ATGAGCGCCGAACGCATTTTCGATATCCGCAACCTCCATGTGACGTTCGATACGCCGGATGGCCGCATAAATGCCGTGCG
CGGCGTCGACATGCATGTGAATGCAGGAGAAACCGTCGCTGTGGTGGGAGAATCGGGCTCTGGGAAGAGCCAGGTGATGA
TGGCGGCCATGGGCCTGCTCGCCTCCAACGGGCGCGCAGAGGGCGCTGTCTCCTATCGCGGGCAGGAGCTGATCGGGCTG
CCGAAAAACAGGCTCAACCGCATCCGGGGCGCCAAGATCACCATGATCTTCCAGGAGCCCATGACCTCCCTCGATCCGCT
CTACACGATCGAGCGGCAAATTTCCGAGCCGATCATGGTGCATGGGGGCCTCTCGCCTTCCGCAGCGCGCAGAAAAGCGT
TGGAGCTCCTGAAGCTGGTGCACATTCCCGACCCCGAGCGGCGGCTTAAATCCTATCCGCACGAACTTTCAGGCGGACAG
CGCCAACGCGTGATGATCGCCATGGCGCTGGCGAACGACCCTGATCTCCTGATCGCCGACGAGCCGACCACCGCCCTCGA
TGTGACCATCCAGGCGGAGATCCTACGGCTGCTGGCCGAGCTTCAGAAGAAGCTCGGCATGGCCATCCTCTTCATCACGC
ACGATCTCGGGATCGTCGAAGCCTTCGCCGACCGGGTTTATGTGATGCAAAGCGGTGAGGTGGTGGAGGAGGGAACGACC
CGGCAGATCTTCACCCGCCCCGCCAAGGACTACACCAAGATGCTTCTCGCAGCCGAGCCGGAAGGATCCAAGCCGCCGGT
TCAGGACGATTCTCCGGTCCTTCTCGATGCGAAGGGAGTGTCGGTGACCTTTACCGCCGGAGGCGGTTTCCTCTCGCGGT
CCGCATTCGAGCTCAAGGCTGTGCAGGACGTGACGCTTTCACTGCGGGCAGGCCAGACAATCGGCATTGTGGGCGAATCG
GGCTCGGGCAAATCGACGCTCGGCCGTGCGATCCTGCAGCTCCTGCCGTCGGACGGCCGCGTGGTCTACCAAAGCGTGCC
GATCCAGGGTCTCGACCGGGCCGGGATGCGGCCCTACCGCAAGAACCTGCAAATGGTCTTCCAGGACCCCTATGGCAGCT
TAAGCCCGCGGATGACGGTGGGGGAAATCGTCACAGAGGGCCTTCTGGTGCACGAACCGCAGCTTTCCGCGCGCGAGCGT
GATGAAGCGGCGATCAAGGCGCTGAAGGAAGTCGGCCTCGACCCCATCGCGAGGAACCGATTCCCGCATGAATTTTCAGG
CGGTCAGCGCCAGCGCATCGCCATCGCCCGCGCGGTGATCCTGAAGCCTACGGTCATCGTGCTCGATGAGCCCACCTCTG
CGCTGGACCGCTCCATACAGAAGCAGATCATCAACCTGCTGCGGCAAATCCAGAAGAGCTACGGGCTTTCCTATATTTTC
ATCAGCCACGACTTGGCCGTGGTAAGGGCGCTTGCGGACTATACGATCGTGATGAGGACCGGCAGAGTGGTGGAGGAAGG
ACCGACGGAGGAGGTCTTCCGGACTCCTAAGAGCGATTACACCCGCGCGCTCATGCAGGCGGCCTTCAATCTCAAGGAGG
TGCTGAGCCGGCAAGCGGTGGCGCCCGCATAG

Protein sequence :
MSAERIFDIRNLHVTFDTPDGRINAVRGVDMHVNAGETVAVVGESGSGKSQVMMAAMGLLASNGRAEGAVSYRGQELIGL
PKNRLNRIRGAKITMIFQEPMTSLDPLYTIERQISEPIMVHGGLSPSAARRKALELLKLVHIPDPERRLKSYPHELSGGQ
RQRVMIAMALANDPDLLIADEPTTALDVTIQAEILRLLAELQKKLGMAILFITHDLGIVEAFADRVYVMQSGEVVEEGTT
RQIFTRPAKDYTKMLLAAEPEGSKPPVQDDSPVLLDAKGVSVTFTAGGGFLSRSAFELKAVQDVTLSLRAGQTIGIVGES
GSGKSTLGRAILQLLPSDGRVVYQSVPIQGLDRAGMRPYRKNLQMVFQDPYGSLSPRMTVGEIVTEGLLVHEPQLSARER
DEAAIKALKEVGLDPIARNRFPHEFSGGQRQRIAIARAVILKPTVIVLDEPTSALDRSIQKQIINLLRQIQKSYGLSYIF
ISHDLAVVRALADYTIVMRTGRVVEEGPTEEVFRTPKSDYTRALMQAAFNLKEVLSRQAVAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-84 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-101 42