Gene Information

Name : Meso_3434 (Meso_3434)
Accession : YP_675970.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3712884 - 3713675 bp
Length : 792 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bja:bll6807 dehydrogenase

DNA sequence :
ATGGCTCTGGACGGGAAAACGGCGGTTGTCACAGGCGGGGCCGGCGGGATCGGCTATGCCGTTGCGGAGCGGTTTTTGCG
AGAAGGCATGCGCGTCGTAATCGCCGATATTGACGGAGAAAAGGGCACCCGTTCACTGAAGAGCCTTGAGAAACTGGGCG
AAGCCTGGTTTGCCAAGGCGGACGTCGGGAGGAGCCTGGATGTCCATAATCTGATTGCTTTCACCATTGATGCGCTGGGG
GACATTGATGTCCTTGTGAATAATGCCGGGATCGCTCACGGCGCAGACTTCCTCGATCTGAGGGAGGAGGATTTCGATCG
CGTTTTGCGCGTGAACCTCAAGGGCGCTTTTCTCGTCGGACAGGCTGCGGCCCGATTTATGGTCGAGAAGGTGCAAAATG
GCGGGCCGGCCGGGGCAATCATCAACATGTCCTCCGTCAACGCGGTTTTCGCAATCGCCGATCAGGTGCCCTATTCGATC
TCGAAGGGCGGCGTGAACCAGCTCACCAAGGTGATGGCGCTCGCGCTTGCGCCACATGGCATACGGGTCAATGCGATCGG
ACCCGGCTCCATCATGACCGACATGCTTACGAGCGTTAATGATGATCCAGATGCTCGGGAACGCATTCTCTCGAGAACTC
CGCTTGGCCGCATTGGTGATCCTCAAGAGATCGCATCTATTGCAGCATTCCTGGCCTCTGACGAAGCAAGCTATATTACT
GGCCAGACAATTTATGCCGATGGTGGACGCTTGCCGCTAAACTACACCGTCTCCGTTCGGTCCGAGGATTAA

Protein sequence :
MALDGKTAVVTGGAGGIGYAVAERFLREGMRVVIADIDGEKGTRSLKSLEKLGEAWFAKADVGRSLDVHNLIAFTIDALG
DIDVLVNNAGIAHGADFLDLREEDFDRVLRVNLKGAFLVGQAAARFMVEKVQNGGPAGAIINMSSVNAVFAIADQVPYSI
SKGGVNQLTKVMALALAPHGIRVNAIGPGSIMTDMLTSVNDDPDARERILSRTPLGRIGDPQEIASIAAFLASDEASYIT
GQTIYADGGRLPLNYTVSVRSED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 9e-28 41