Gene Information

Name : Meso_3116 (Meso_3116)
Accession : YP_675653.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3384291 - 3384980 bp
Length : 690 bp
Strand : -
Note : TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mlo:mll3716 phosphate regulatory protein, PhoB

DNA sequence : 
ATGATCGCACCGAAAATCATGGTCGTGGAGGACGACGAGCCGCTTTGCGTGCTGCTTCGCTACAATCTTGAAGCCGAGGG
CTATCAGGTCGAAGTGGTCACGCGCGGTGACGAGGCTGAGGTGCGGCTGCAGGAAAACGTGCCGGACCTGCTCGTCCTCG
ACTGGATGGTACCCGCGATTTCAGGAATCGAGCTCTGCCGGCGCCTTAAAATGCGGCCTGAGACCGAGCGACTGCCCATC
ATCATGCTGACCGCCCGCGGCGAGGAGAGCGACCGCGTGCGCGGCCTTTCCACCGGCGCCGACGATTATCTGGTAAAGCC
CTTCTCCACGCCAGAATTCATCGCCCGCGTCCGGGCGCTTTTGCGGCGGGCAAAGCCGGAAGTGCTTTCAACGGTGCTCA
AGGTGGGCGATATCGTGCTCGACCGCGAAGCGCATCGCGTTTATCGGCGCAAGAACGAGATCCATCTTGGCCCCACGGAG
TTCCGCCTGCTCGAATTCATGATGCAGCATCCGGGCCGCGTCTTTTCGCGCAGCCAGCTCCTCGACAATGTCTGGGGCGA
GACGATCTATATCGACGAGCGCACGGTCGACGTCCATGTGGGCCGCCTGCGCAAGGCCGTTAACCAGGGCCGCATGCCGG
ATGTCATTCGCACCATCCGTGGGGCTGGATACGCTATCCGGGAGAACTGA

Protein sequence : 
MIAPKIMVVEDDEPLCVLLRYNLEAEGYQVEVVTRGDEAEVRLQENVPDLLVLDWMVPAISGIELCRRLKMRPETERLPI
IMLTARGEESDRVRGLSTGADDYLVKPFSTPEFIARVRALLRRAKPEVLSTVLKVGDIVLDREAHRVYRRKNEIHLGPTE
FRLLEFMMQHPGRVFSRSQLLDNVWGETIYIDERTVDVHVGRLRKAVNQGRMPDVIRTIRGAGYAIREN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-33 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_3116 YP_675653.1 two component transcriptional regulator HE999704.1.gene2815. Protein 5e-40 43
Meso_3116 YP_675653.1 two component transcriptional regulator AE000516.2.gene3505. Protein 5e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_3116 YP_675653.1 two component transcriptional regulator VFG1390 Protein 5e-38 44
Meso_3116 YP_675653.1 two component transcriptional regulator VFG1702 Protein 4e-34 43
Meso_3116 YP_675653.1 two component transcriptional regulator VFG1563 Protein 4e-34 42