Gene Information

Name : Meso_2996 (Meso_2996)
Accession : YP_675533.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3262040 - 3264715 bp
Length : 2676 bp
Strand : -
Note : PFAM: AAA ATPase, central region Clp, N terminal ATPase associated with various cellular activities, AAA_5 ATPase AAA-2; SMART: ATPase; KEGG: mlo:mll3429 endopeptidase Clp ATP-binding chain B, clpB

DNA sequence :
TTGGGGGTCCGTCACATTGGCCTGCTCGATGCCGCCAAGCGGGTCGGCACGGAGATGGAGACGTGGAACATGGACATCGA
AAAATATTCCGAGCGCGTGCGTGGCTTTATTCAGGCTGCCCAGACGCTCGCCCTTTCCAGAAATCACCAGCAGTTTTCGC
CTGAGCACATCCTGAAAGTGCTCGTTGATGACGAGGAAGGACTCGCGGCGAATCTCATCGAGCGTGCCGGCGGGCGGGCG
CGGGATGTGAAACTGGGCGTCGACGCCGCGCTTGAGGCGTTGCCGCGTGTCGAAGGCGGCAGCGGCCAGCTTTATCTGGC
GCAGCCGCTGGCAAAGGTTTTCTCCACCGCTGAAGAACTCGCGAAGAAGGCCGGGGACAGTTTCGTTACCGTCGAGCGCC
TGCTCATGGCGCTGGCCATGGAGAAATCCGCCAAGAGCGCGGATATTCTGGCAAAGGCCGGTGTCACTCCGACGGCTCTC
AATCAGGTCATAAACGATATCCGCAAGGGCCGAACCGCCGATTCGCCGAATGCGGAGCAGGGCTATGACGCGCTGAAGAA
ATATGCGCGCGATCTGACAGCCGAGGCGCGGGCGGGCAAGCTTGATCCCGTGATCGGCCGCGATGACGAGATCCGCCGCA
CGATCCAGGTCCTTTCCAGGCGCACAAAAAACAATCCGGTGCTGATCGGCGAACCCGGCGTAGGCAAAACCGCCATCGCC
GAGGGGCTGGCGCTCAGGATCGTGAACGGCGACGTGCCCGAATCGCTCAAGGACAAGCAGCTCATGGCGCTCGACATGGG
TGCGCTGATCGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTTTCCGAGATTCAGGCCGCGG
CCGGCGGTGTCATCCTCTTCATCGACGAGATGCACACGCTGGTTGGCGCCGGTAAAGCGGATGGCGCGATGGACGCTTCC
AATCTTCTGAAGCCCGCGCTGGCGCGGGGCGAGCTGCACTGTGTGGGCGCGACGACGCTCGATGAATACCGGAAATATGT
GGAAAAGGACGCGGCGCTCGCCCGCCGCTTTCAGCCTGTCTACGTGAACGAGCCTTCGGTGGAGGACACTATCTCCATCC
TGCGCGGGCTGAAGGAGAAATACGAGCAGCACCACAAGGTGCGCGTCTCCGATTCCGCTCTTGTGGCGGCGGCCAACCTG
TCGAACCGCTACATCACCGATCGTTTCCTGCCCGACAAGGCCATCGACCTGGTGGACGAGGCGGCATCGCGCCTGCGCAT
GCAGGTGGATTCCAAGCCGGAGGAACTGGATGAGGTCGACCGGCGCATCATGCAGCTCAAGATCGAACGCGAGGCGCTGC
GGGTCGAGAAGGACGAGGCTTCGAAGGATCGGCTTGAACGGCTAGAGAGGGAATTGGCCGAGCTCGAGGAGCAGTCGGCC
AATATCACCGCCAAATGGCAGGCCGAAAAGCAGAAACTGGGCCTTGCCGCCGAACTCAAGAAGCAGCTTGACGAAGCGCG
CAACGATCTTGCGATTGCTCAGCGCAAAGGCGAGTTCCAGCGCGCGGGCGAGCTGGCCTATGGCCGTATCCCCGAGCTTG
AGAAGAAGCTGAAGGAGGCTGAGGAGCAGGACGGCAAGGGCTCGCTCGTCGAAGAGACGGTGACGCCTGACCATGTGGCG
CATATCGTTTCCCGCTGGACCGGCATTCCCGTCGACAAGATGCTCCAGGGCGAGCGTGAAAAGCTGCTCAGGATGGAAGA
CGAGCTCGCCAAGCGTGTGATTGGGCAAGGTGAGGCGGTGCAAGCGGTTTCCAAAGCCGTGCGGCGCGCGCGCGCCGGGT
TGCAGGATCCGAACCGGCCGCTCGGCTCGTTCATGTTCCTGGGGCCCACGGGCGTGGGTAAGACGGAGCTGACCAAGGCG
CTCGCCGCTTTCCTATTCGATGACGAGCAGGCGATGGTGCGCATCGACATGTCGGAGTTCATGGAGAAGCACTCGGTTGC
CCGGCTGATCGGCGCTCCTCCCGGCTATGTGGGTTATGACGAGGGCGGCGTGTTGACCGAAGCTGTCCGCCGCAGGCCCT
ATCAGGTGATCCTGTTCGACGAGATCGAGAAAGCGCACCCGGATGTCTTTAATGTGCTGCTCCAGGTGCTGGACGACGGC
AGGCTCACGGATGGCCAAGGCCGGACGGTCGACTTCCGCAACACTCTGATCATCATGACGTCCAATCTGGGCGCGGAGTA
CCTTGTCAATCTGGCCGAAGGCGAGGACGTGGACAAGGTGCGCGACGAGGTGATGGCTGTCGTGCAGGCTTCGTTCCGGC
CTGAATTCCTGAACCGTGTGGACGAGATCATCCTCTTCCACCGCCTGCGCCGGCAGGATATGGGCGATATCGTCCGCATC
CAGCTCAAGCGCATCGGGCGGCTGCTGGAAGACCGCAAGATCACGCTCGAGCTCGACCAGGAGGCAATCGACTGGCTTGC
CGACAAGGGCTACGATCCTGCCTATGGCGCTCGTCCGCTGAAGCGGGTCATGCAGAAGGAACTGCAGGATCCGCTGGCCG
AGAAGATCCTGATGGGAGAGATCTTCGATGGCTCGACCGTCAAGATCACCGCCGGTTCAGATAGGCTGATCTTCCGCCCG
CGGAAGAATTCGGAGGCTGCGGCGGAAGCAGCGTGA

Protein sequence :
MGVRHIGLLDAAKRVGTEMETWNMDIEKYSERVRGFIQAAQTLALSRNHQQFSPEHILKVLVDDEEGLAANLIERAGGRA
RDVKLGVDAALEALPRVEGGSGQLYLAQPLAKVFSTAEELAKKAGDSFVTVERLLMALAMEKSAKSADILAKAGVTPTAL
NQVINDIRKGRTADSPNAEQGYDALKKYARDLTAEARAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIA
EGLALRIVNGDVPESLKDKQLMALDMGALIAGAKYRGEFEERLKAVLSEIQAAAGGVILFIDEMHTLVGAGKADGAMDAS
NLLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVYVNEPSVEDTISILRGLKEKYEQHHKVRVSDSALVAAANL
SNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEVDRRIMQLKIEREALRVEKDEASKDRLERLERELAELEEQSA
NITAKWQAEKQKLGLAAELKKQLDEARNDLAIAQRKGEFQRAGELAYGRIPELEKKLKEAEEQDGKGSLVEETVTPDHVA
HIVSRWTGIPVDKMLQGEREKLLRMEDELAKRVIGQGEAVQAVSKAVRRARAGLQDPNRPLGSFMFLGPTGVGKTELTKA
LAAFLFDDEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDG
RLTDGQGRTVDFRNTLIIMTSNLGAEYLVNLAEGEDVDKVRDEVMAVVQASFRPEFLNRVDEIILFHRLRRQDMGDIVRI
QLKRIGRLLEDRKITLELDQEAIDWLADKGYDPAYGARPLKRVMQKELQDPLAEKILMGEIFDGSTVKITAGSDRLIFRP
RKNSEAAAEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-107 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_2996 YP_675533.1 ATPase VFG2076 Protein 3e-124 42