Gene Information

Name : Meso_2820 (Meso_2820)
Accession : YP_675361.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 3069116 - 3070426 bp
Length : 1311 bp
Strand : +
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCACCGGTTTTTTCGGCAACCTGCAGCCGATCTCTTATGAAGGGCCGCAAAGCGACAATCCCCTGGCCTTCCGCCA
TTATAACCCCGACGAGGTCGTGCTCGGCAAGCGGCTTGAGGACCATTTGCGTTTCGCCGTCTGCTATTGGCACACCTTCG
TCTGGCCCGGCGGCGATCCCTTCGGCGGACAGACCTTCGAACGCCCCTGGTTCGGCGATACGATGGAGAGGGCAAGGCTC
AAGGCGGATGTCGCATTCGAGCTGTTCGAAATCCTCGGAGTTCCTTTTTTCACCTTCCACGACGCCGATGTGCGCCCGGA
AGGCGCCTCCTATTCCGAGAGCGTAGCCCGCCTGAACGACATCGCGGATTATATCGCGGCCAAGATGGAGAAGACGGGCG
TCAGGCTTCTTTGGGGCACGGCCAATCTCTTTTCCCACCGCCGCTTCATGGCGGGCGCCGCCACCAATCCCGATCCGGAT
GTTTTCGCCTACGCGGCCGCTACCGTGAAGGCCTGCATCGACGTGACGAAGCGCCTCAATGGCGAGAACTATGTGCTCTG
GGGCGGGCGAGAGGGCTACGAAACCCTGCTCAACACCGACTTGGGCCGCGAACTGGATCAGCTCGGCCGCTTCCTCTCCA
TGGTGGTGGACTACAAGCATCGAATTGGCTTCAAGGGCGCGATTCTCATCGAGCCAAAGCCGCAGGAACCCACCAAGCAC
CAGTACGATTTTGACGTCGGCACGGTCTACGGCTTCCTGAAGCGCTACGGGCTGGAAGATGAGGTGAAGGTGAATATCGA
GCAGGGCCATGCGCTGCTCGCCGGCCATTCCTTCGAGCATGAGCTTGCGCTTGCCGCCACGCTCGGGATTTTCGGCTCCA
TCGACATGAACCGGAACGACTATCAGTCCGGCTGGGATACCGACCAGTTCCCCAACAATGCGCCGGAGGCGGCCCTGGCC
TATTACTATATTCTCCAGGCCGGGGGCTTCACGACGGGAGGCACCAATTTCGATGCCAAGCTGCGTCGTCAGTCGCTAGA
CCCGGAAGACCTGGTCGCCGCCCATATCGGCGGCATGGATATCTGCGCCCAGGGGCTCAAGGCCGCCGCCCGTATGATCG
AGGACAAAGCGCTGAGCGGACCCCTTGAGGAGCGCTATTCGGGATGGAACGCCACTGAGGCGCAGGCGATGCTGAAGGGC
GAGCGCTCGCTCGAAGCCATCGCCGAGCGCGTGGCGCGTGAGAACCTTGATCCGAAGCCGCGTTCGGGTCGCCAGGAGAA
GCTTGAGAATATCATAAACCGCTACGTTTAG

Protein sequence :
MSTGFFGNLQPISYEGPQSDNPLAFRHYNPDEVVLGKRLEDHLRFAVCYWHTFVWPGGDPFGGQTFERPWFGDTMERARL
KADVAFELFEILGVPFFTFHDADVRPEGASYSESVARLNDIADYIAAKMEKTGVRLLWGTANLFSHRRFMAGAATNPDPD
VFAYAAATVKACIDVTKRLNGENYVLWGGREGYETLLNTDLGRELDQLGRFLSMVVDYKHRIGFKGAILIEPKPQEPTKH
QYDFDVGTVYGFLKRYGLEDEVKVNIEQGHALLAGHSFEHELALAATLGIFGSIDMNRNDYQSGWDTDQFPNNAPEAALA
YYYILQAGGFTTGGTNFDAKLRRQSLDPEDLVAAHIGGMDICAQGLKAAARMIEDKALSGPLEERYSGWNATEAQAMLKG
ERSLEAIAERVARENLDPKPRSGRQEKLENIINRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-98 48
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-98 48