Gene Information

Name : Meso_2755 (Meso_2755)
Accession : YP_675297.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : capsule polysaccharide biosynthesis
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3563
EC number : -
Position : 3002110 - 3004134 bp
Length : 2025 bp
Strand : +
Note : PFAM: Capsule polysaccharide biosynthesis; KEGG: syd:Syncc9605_2216 possible polysaccharide export protein

DNA sequence : 
ATGAATAGCAAACGGCATTCCGGTGGCCACGTCCTAGCCTCGCGCGGCATTGCGAAGATTCCGCACCTTCAGGTTTTTCT
GGATGGATGGGGAAGCGCAGTGGTCGGCTGGGGCCGGAAGCCTTCCGGTCACCGTGCAATTGCGCTTGCTTCAAAAAGGA
AGCTCCCGTTTCTTCTGTTGGAAGATGGTTTTTTGAGATCGGTCGAGCGCTCCGGTCCCCCTCTTTCCCTGATCGTGGAT
GATATCGGCATTTATTATGATGCCTCCGCGCCATCGCGACTTGAGACACTGGTCCGTGAGCCGCTTTCTGAAGAGCAGGT
CCGGCGGACGCTTCTCCTGATGAGGGCCTGGCGCGATGGCCATATCTCGAAATACAATCATGCGCGGGACTATGACGGGC
CTCTGCCCTCACGTTTCGTGCTTGTTGTCGATCAGACCTTTGGAGACGCTTCCGTTCGCCATGGCTTGGCCGACGCATCC
TCCTTCCAAGGCATGCTTCAAGCTGCCTTGGATGAAAATCCCGAATGCAGCGTGCTCGTGAAATCTCACCCTGACGTCGT
CAGACGGAGGAAACGTGGCTATTTTGAGCCGCGCAAGCTCGCCGATCACCCGCGTGTCAAATTCATCCTTGATGACTGTC
GTCCGGCCAGGCTCCTGGAGCAGGCTGAGGCGGTCTATACGGTCACATCCCAGCTTGGTTTCGAAGCGCTCATTTGGGGA
AAGCGCGTCCGATGCTTCGGCATGCCGTTCTATGCCGGTTGGGGGCTGACGGATGATGCGCTTGCAGCCCCCGCGCGAAG
AAAATCCGCCACGCTCGAGCAACTGGTCCATGCATCACTGGTCCGCTATCCCCGTTACCGGGATCTCCACGGCGAAACCC
CAGCCGACGTGGAAGCGGTAATAGAGCATGTCACGCTTCAGACGAGAATGCGCGCCCGCTTTTCTCCCGAACTTCATGCT
CTGGGCTTCTCATGGTGGAAAGCACCTATTCTCAAGCGTTTTCTGGCGGGATCGAAGCTGAATTTCGTCGGAAGAATGAG
CGCCGTTCCCCCAAACGCGACAGTCGCCCTATGGGGCGCCCGCCACATCGGCGAAACGCCTCCAGGGACGAAAATCATTC
GAATAGAAGACGGATTCCTGCGTTCCGTCGGTCTCGGTTCCGAACTTTCCAGGCCGGTTTCCTGGATATGTGACGAGGAG
GGTATCTACTATGATGCATCCCGCCCTTCCCGCCTGGAGCGGATTCTCTCCGATACCGATTTCGACCAGCTTCTCTTGGA
TCGTGCCGGAAAGCTCCGCCAAGCCATCCTGCGGGCGCGGCTGACCAAATACAATCTGGGCGCCCCGCGCTGGGTTCGTC
CCGCAAGGGCGGTGCGGGTCATCCTTGTTCCCGGGCAGGTGGAAAGCGATGCCTCCCTTCGTTTTGGTGCTCCCGGGATT
AAGACGAATCTGGAGCTCCTGAAGGCCGTTCGCCAGGCCAATCCAGACGCCTATGTTGTTTACAAGCCGCACCCCGACGT
TGCGGCGGGGGTGCGCCATCAGCCTGGCAACACCCGATGGAGCGACCTCTGCGATGAGGTCGTCGTCACCGCCGATATGG
CACAGCTTCTCGAAGAAGTGGACGAGGTGCACACACTCACATCGCTGACCGGCTTTGAGGCCCTGCTGCGGGAACTGCCG
GTGACCTGTTATGGCCAACCGTTCTACGCGGGCTGGGGACTGAGCTGCGACATGATACCGATTGAACGCCGCAAGCGGCG
GCTGAGCCTGGACGAACTCGTTGCGGGTAGTCTCATCCTCTATCCCACCTATCACAGCCGCAGCTCCGCCGGCTTCATCA
CGCCTGAGCAAGCCGTCGCCGAACTGAGCGCCTGGCGCTCGGCAAGCGCGGGAGAACCCTCGATGGTTCGCAAGCTTCTG
CGTCCATTGCTCTACCTGCGCGATCTCACAAGAAATGGCGTTGGGACGGCCGCTCCCAGCTTCTGTCAGCCGGAGCATCT
GGAGGTGGACCGTGGCAGACAATAA

Protein sequence : 
MNSKRHSGGHVLASRGIAKIPHLQVFLDGWGSAVVGWGRKPSGHRAIALASKRKLPFLLLEDGFLRSVERSGPPLSLIVD
DIGIYYDASAPSRLETLVREPLSEEQVRRTLLLMRAWRDGHISKYNHARDYDGPLPSRFVLVVDQTFGDASVRHGLADAS
SFQGMLQAALDENPECSVLVKSHPDVVRRRKRGYFEPRKLADHPRVKFILDDCRPARLLEQAEAVYTVTSQLGFEALIWG
KRVRCFGMPFYAGWGLTDDALAAPARRKSATLEQLVHASLVRYPRYRDLHGETPADVEAVIEHVTLQTRMRARFSPELHA
LGFSWWKAPILKRFLAGSKLNFVGRMSAVPPNATVALWGARHIGETPPGTKIIRIEDGFLRSVGLGSELSRPVSWICDEE
GIYYDASRPSRLERILSDTDFDQLLLDRAGKLRQAILRARLTKYNLGAPRWVRPARAVRVILVPGQVESDASLRFGAPGI
KTNLELLKAVRQANPDAYVVYKPHPDVAAGVRHQPGNTRWSDLCDEVVVTADMAQLLEEVDEVHTLTSLTGFEALLRELP
VTCYGQPFYAGWGLSCDMIPIERRKRRLSLDELVAGSLILYPTYHSRSSAGFITPEQAVAELSAWRSASAGEPSMVRKLL
RPLLYLRDLTRNGVGTAAPSFCQPEHLEVDRGRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsC AAZ04470.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 4e-98 45
kpsC YP_854335.1 capsule polysaccharide export protein KpsC Not tested PAI I APEC-O1 Protein 5e-98 45
lipA NP_273145.1 capsule polysaccharide modification protein Not tested IHT-A Protein 1e-109 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_2755 YP_675297.1 capsule polysaccharide biosynthesis VFG0704 Protein 1e-102 42
Meso_2755 YP_675297.1 capsule polysaccharide biosynthesis VFG0692 Protein 2e-114 42
Meso_2755 YP_675297.1 capsule polysaccharide biosynthesis VFG0259 Protein 5e-110 42