Gene Information

Name : Meso_2561 (Meso_2561)
Accession : YP_675110.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2750313 - 2752139 bp
Length : 1827 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGGATGCCCGGAACAACCCCAAGCCCGAGATTACAACAGGCCCCCTTCCCGCCTCCAGCAAGGTCTACAAGCCCGGCAC
GCTGCACTCTGAGATCCGCGTGCCGATGCGCGAGATCGCCGTCCACCCCACGGCGGGCGAACCGCCCGTTACGGTCTATG
ATTCTTCCGGACCCTACACGGATACGAGCGTCACCATCGACATCGAGAAGGGCCTGCCGCGCCTGCGCGAAACCTGGATC
GAGGCGCGTGGCGACGTGGAGCGCTATGACGGCCGCATCGTCAAGCCGGAGGACAACGGCTTCGTATCGGGCGAGCGGCT
GACGCCTGAATTCCCAGTCCGCAACCGTCCGCTTAAGGCGCGGGACGGCAAGGCAGTCACACAGCTTGCCTATGCGCGGG
CGGGCATTGTGACGCCGGAGATGGAGTTCATCGCCATTCGCGAAAATCTCGGGCGCGAAAAGCTGAAGGAAAAGCTCGTC
CGTGACGGTGAGAGCTTCGGCGCGGCGGTTCCCGACTATGTGACGCCGGAGTTCGTGCGAGACGAGGTGGCGCGCGGGCG
GGCCATCATTCCAGCCAATATCAACCACCCCGAATCCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAACG
CCAATATCGGCAATTCCGCTGTCACCTCCTCCATGGCCGAGGAGGTGGAAAAGCTGGTCTGGGCAACGCGATGGGGCGCG
GACACGGTTATGGATCTTTCGACCGGCCGCAACATCCACAATATCCGTGAATGGATCATCCGCAATTCCCCCGTACCCAT
CGGTACGGTGCCGATCTATCAGGCGCTGGAGAAGGTGGGCGGCATTGCCGAGGAGCTCACCTGGGAGGTCTTCCGCGATA
CGCTTATCGAGCAGGCCGAGCAGGGCGTGGATTATTTCACCATCCATGCCGGTGTCAGGCTCCACTATGTGCCGCTGACG
GTGAACCGCGTAACGGGCATTGTCTCGCGTGGCGGGTCCATCATGGCGAAGTGGTGCCTCGCTCACCATAAGGAGAGCTT
TCTCTACGAGCATTTCGCGGAGATCTGCGACATCTGCCGCGCCTATGACGTCTCCTTCTCGCTGGGCGACGGACTTCGCC
CCGGCTCGATCGCGGATGCCAATGACGCAGCGCAATTTGCCGAGTTGGAGACGCTGGGCGAGCTGACGAAAATCGCCTGG
GCCAAGGATTGCCAGGTGATGATCGAGGGACCCGGCCATGTTCCCATGCACAAGATCAAGGAGAACATGGACAAGCAGCT
CGAGATCTGCGGCGAGGCGCCATTCTATACGCTCGGGCCGCTCACAACCGACATCGCGCCGGGCTACGACCACATCACTT
CGGCCATCGGCGCCGCAATGATCGGCTGGTTCGGAACGGCCATGCTCTGTTACGTGACCCCCAAGGAGCATCTGGGCCTG
CCCGACCGTGATGACGTGAAGACCGGCGTCATCACTTACAAGATCGCGGCGCACGCCGCTGACCTGGCCAAGGGCCACCC
GGCGGCCAAGGTGAGGGACGACGCGTTGTCGCGCGCCCGTTTCGAATTCCGCTGGGAGGACCAGTTCAACCTCTCGCTCG
ACCCCGAAACGGCGCGCGCGCTACATGATGAGACCCTGCCCAAGGAGGCGCATAAAGTGGCGCATTTCTGCTCCATGTGC
GGCCCGAAATTCTGCTCCATGCGGATCTCGCACGACATTCGGGCCGAGGCGCAGAAGGAAGGCATGGCCGCAATGGCCGA
GAAGTACCGCGAGGGCGGGGATTTGTATGTGGCTGTGGAGGAGACGGCAGAGACGCAGGGCGCTTGA

Protein sequence :
MDARNNPKPEITTGPLPASSKVYKPGTLHSEIRVPMREIAVHPTAGEPPVTVYDSSGPYTDTSVTIDIEKGLPRLRETWI
EARGDVERYDGRIVKPEDNGFVSGERLTPEFPVRNRPLKARDGKAVTQLAYARAGIVTPEMEFIAIRENLGREKLKEKLV
RDGESFGAAVPDYVTPEFVRDEVARGRAIIPANINHPESEPMIIGRNFLTKINANIGNSAVTSSMAEEVEKLVWATRWGA
DTVMDLSTGRNIHNIREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEVFRDTLIEQAEQGVDYFTIHAGVRLHYVPLT
VNRVTGIVSRGGSIMAKWCLAHHKESFLYEHFAEICDICRAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAW
AKDCQVMIEGPGHVPMHKIKENMDKQLEICGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGL
PDRDDVKTGVITYKIAAHAADLAKGHPAAKVRDDALSRARFEFRWEDQFNLSLDPETARALHDETLPKEAHKVAHFCSMC
GPKFCSMRISHDIRAEAQKEGMAAMAEKYREGGDLYVAVEETAETQGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 69
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 69
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 65