Gene Information

Name : Meso_2507 (Meso_2507)
Accession : YP_675056.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2685671 - 2687182 bp
Length : 1512 bp
Strand : -
Note : TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bms:BRA1161 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase

DNA sequence :
ATGAGCGTTCTCAACGAGAACATCGCGCGCGCCGTCGAATATCTGAAACCGTTTCGCGAAGGCGGTGTCCTGAACCATGT
CGGTGGCGCACAGGTACCTGCTGCTTCCGGCGAGACGTTCGAGACCGTCTCGCCCGTCGACATGTCGACACTTGCCAAGG
TGGCCAGGGGTGGGGCGGCCGACACCGACAAGGCGGTTGCCGCGGCCAGCGAAGCGTTCAAAACATGGTCGAAGACATCG
GGCGCAGAGCGACGGAAGATCCTGATCAAGGTGGCCGAAGGGATCGAGGCGCGGGCTGAGGAGATCGCGTTCATCGAGTG
CATGGATACCGGACAGGCGCTTCGTTTCATGTCCAAGGCGGCTATTCGCGGCGCCGAGAACTTCCGTTTCTTTGCCGATC
AGGCACCAGGCTCCGAGGACGGCAGGGCGCTTCGGACCCCCGCCCAGATGAATGTCACCTCGCGCCGCCCTATCGGGCCG
GTGGGTGTGATTACGCCGTGGAATACGCCTTTCATGCTCTCGACCTGGAAGATTGCTCCGGCGCTGGCGGCGGGCTGCAC
GGTAGTGCACAAGCCGGCGGAGTTCTCCCCGCTCACGGCCAACCTGCTCGTGCAGATCGCTGAGGAGGCCGGACTGCCGA
AGGGCGTTCTGAACGTCGTGAATGGCTACGGAGAGGAGGCAGGCCGCGCCTTGACGGAGCATAAGGGGATCAAGGCAATC
GCCTTTGTCGGCGAAAGCCGTACCGGTTCCATGATCATGAAGCAGGGCGCAGACACGCTAAAGCGCGTCCATTTCGAGCT
TGGCGGAAAGAATCCCGTTATCGTGTTCGACGACGCCGATCTCGACCGTGCGGTCGATGCCGCCGCTTTCATGATCTATT
CACTGAACGGGGAGCGTTGCACGTCCTCATCACGCCTGCTTGTGCAGGAATCGATTTACGAGGAATTCACCCGGCGCGTG
GCCGAGGTCGCGCGCGGCATAAAAATCCGCCACCCCCTCGATCCTGAAACGGTGATCGGTCCGCTGATTCACCCTTCGCA
TGAAAAGAAGGTGCTTTCCTATTTCGAAAAGGCGAAAGAAGAAGGCGCGATCATCGCAACGGGCGGCGAGAAATATGGCG
AAGCCGGCTGCTTCGTGCGCCCGACGCTGTTTACGAACGCCCGCAACGACATGGCGATCGCTCAGGAGGAGATTTTCGGT
CCGGTGCTGACGGCCATCCCGTTCAAGGACGAGGACGAGGCGCTGGCCATCGCCAACGATGTGAATTATGGCCTGGCAGC
TTATCTCTGGACGCGGGATCTGGGTCGGGCGATGCGCATGACCGACAATCTGGAGGCCGGAATGATCTGGGTGAACTCGG
AGAATGTGCGCCATCTGCCTACGCCATTCGGCGGGGTGAAGGCCTCTGGCATCGGGCGTGATGGCGGCGACTGGTCGTTC
GATTTCTACATGGAAACGGTGAATGTCAGCTTCCCGCGCAGGGAACACAAGGTCTCGAAACTCGGCGGCTGA

Protein sequence :
MSVLNENIARAVEYLKPFREGGVLNHVGGAQVPAASGETFETVSPVDMSTLAKVARGGAADTDKAVAAASEAFKTWSKTS
GAERRKILIKVAEGIEARAEEIAFIECMDTGQALRFMSKAAIRGAENFRFFADQAPGSEDGRALRTPAQMNVTSRRPIGP
VGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEFSPLTANLLVQIAEEAGLPKGVLNVVNGYGEEAGRALTEHKGIKAI
AFVGESRTGSMIMKQGADTLKRVHFELGGKNPVIVFDDADLDRAVDAAAFMIYSLNGERCTSSSRLLVQESIYEEFTRRV
AEVARGIKIRHPLDPETVIGPLIHPSHEKKVLSYFEKAKEEGAIIATGGEKYGEAGCFVRPTLFTNARNDMAIAQEEIFG
PVLTAIPFKDEDEALAIANDVNYGLAAYLWTRDLGRAMRMTDNLEAGMIWVNSENVRHLPTPFGGVKASGIGRDGGDWSF
DFYMETVNVSFPRREHKVSKLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-82 47
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-64 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-67 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-68 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-68 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-68 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_2507 YP_675056.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 1e-67 41