Gene Information

Name : Meso_2080 (Meso_2080)
Accession : YP_674638.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2232089 - 2232901 bp
Length : 813 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: rsp:RSP_2596 ABC transporter, ATPase subunit

DNA sequence :
ATGAGCCCGGCGCCATCGGTTATCGTTTCCAGCGTATCGAAGACTTTCCAGCGGGCGAAGGATTTGGCCCCGGTGGAGGC
GCTCAAAGACGTCTCCCTGGATCTTCCGGCCAACAGCTTCGTTACGCTGCTGGGCCCGTCCGGCTGCGGAAAAACCACGC
TCCTCAGGATGATCAACGGGCTCATCCAGCCGGATTCGGGCCGTGTGCTCGTGTTTGGGGAGCCGCCGAAGCCGGGGCCG
CGCATCGGCTTCGTCTTTCAGTCGTTCCGCCTTGTTCCCTGGCTGACAGTCCGAAACAATGTCGGATTTGGCCTGTCGCT
GCAGGGCATCGATAAGGCCGAGCGGAACGACCGCGTGGAATATTATCTGAAGCTCGTGGGCCTCTCACGCTTTGCTGACG
TTTATCCGCACGAGCTTTCAGGAGGAATGAAGCAGCGCGCCGCGCTTGCACGCGCGCTCGCGACAGAGCCCGAGATCCTC
CTGATGGACGAACCATTCGCCAGCCTCGACGCTCAGGTGAGAGAGCTGATGCAGATGGAGATGATGCGGCTCTGGTCGGC
GCGCAGGGGAATTGTGCTCTTCGTCACCCACAGCGTCGACGAGGCGATCATCATGGCAGATCGGATCGTTCTGATGGGGC
CCCGGCCGGGGCGCATCGTCGAAACGATCGAGGTGCCGTTGCCGCGGCCGCGCTGGAACGATGATATCAAGATGCAGCGC
GATTATGTCGAGTTGAGGCAATATCTCTGGAACCGCATTCGTGACATGGTGGTAAGGGATCCCTCTTCGGATTTCTACGT
TGGCGAGACCTGA

Protein sequence :
MSPAPSVIVSSVSKTFQRAKDLAPVEALKDVSLDLPANSFVTLLGPSGCGKTTLLRMINGLIQPDSGRVLVFGEPPKPGP
RIGFVFQSFRLVPWLTVRNNVGFGLSLQGIDKAERNDRVEYYLKLVGLSRFADVYPHELSGGMKQRAALARALATEPEIL
LMDEPFASLDAQVRELMQMEMMRLWSARRGIVLFVTHSVDEAIIMADRIVLMGPRPGRIVETIEVPLPRPRWNDDIKMQR
DYVELRQYLWNRIRDMVVRDPSSDFYVGET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-38 46
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-26 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-27 43