Gene Information

Name : Meso_1832 (Meso_1832)
Accession : YP_674390.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1966879 - 1968699 bp
Length : 1821 bp
Strand : -
Note : PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: sma:SAV3045 putative ABC transporter ATP-binding protein

DNA sequence :
ATGAGCGAGAGCGTCCATATCGCGGGCGGCACCGGCGCGCCGCTGGTCAGCGTCTCCGGCCTTACCGTCAGCTTCGACCG
GCACAGGGAAGAGCCGATCGAGGCAGTGCGCGACGTAAGCTGGTCTATCGGATCGGGCGAGGTGCTGGCGCTGGTCGGCG
AATCCGGCTCGGGCAAGTCGGTCTCGGCGCTTGCCGTCATGGGCCTCCTTCCCAGGAACGCGCGCGTGGCCGGCTCCATA
CGCTGGCGCGGGGAGGAACTGCTCGGTGCCTCCGAGAAGCGGCGCCGGGCCCTGCGCGGCAGCCGCATCGGCCTCGTGCC
GCAGGATCCGATGACGTCGCTCAACCCCGTCTACACCATCGGCGCACAGATCAGGGAAGGCATTAGGGCCCACCAGAAGC
TGAGCGAGAGGGAGATGGCCGAGCGCACGCTGGAGCTTCTCGAAACGATGGGCATCCCGCATGCGCGCGAGCGTATGAAC
AGCTATCCGCACGAGCTTTCAGGCGGCATGCGCCAGCGCGTAGTCATCGCCATGGCGATGGCGAACAACCCCGATTTGAT
CATTGCCGACGAAGCGACCACCGCGCTCGACGTGACCGTGCAGGCCCAGGTGCTGGATGCGCTCAAGAAAGCACAGGCGC
TCACCGGGGCGGCGCTGCTTCTCATAACGCACGACCTTGGTGTGGTGGCGGGCCGTGCAGATCGCGTCGCGGTCATGCAG
CGCGGCGAAGTGGTCGAGCAAGGCACGGTGGATGAGATTTTCTACCAGCCAGCGTCATCTTATACACGCAAGCTGCTCCA
CAGCATCCCCCGATTGAACCACACGCCTGACCTGAGTGCCCCCAGCGATGTCGCGCCCGATGCCGAGGTGATCCATTCAG
CCTTTGAAAGGAAGGTCGGTGCTGAGGGAGCTCCGATCCTATCGATGCGGAATGTCGGGAAGCATTTTCCCGTCTATTCG
CGCGGCGTTATTCGGGGCAGGGTGGGGGTGATCAAGGCCGTCGCCGGCGTCGATCTCGACGTGGAGGCGGGCACCACGCT
CGGCATCGTCGGCGAGTCGGGTTCGGGAAAGACGACGCTCATCCGATCGCTTTTCAACCTGGAGCCAATCACCCACGGCA
CTATTCTGTTCGATGGCCAGGACGTTCACCGAATGCCGCCGCGCGATAGGCGGCGGATGCGCAAATGCGTGCAGATGGTC
TTCCAGGATCCATATGCGTCGCTAGACCCGATGATGACGGTCAGGGACATCCTGATGGAGCCGGCGGTCATCAACCGAAT
GGATCGCAAGCTCGCTGAGCGCCGCGTCATGGAGCTGCTCGAGCGGGTGCACCTCAAGCCGGAGCACGCCGCGCGCTATC
CCAACGAATTCTCCGGCGGGCAGCGCCAGCGCATCGCCATCGCGCGTGCGCTGATGCTGTATCCGCGGCTCCTGGTGCTC
GACGAGCCCGTCTCCTCTCTCGACGTGTCTATTCAGGCAGAGGTGCTGACGCTTCTCAAAGAACTGCAGAAGGACCTCAA
CCTTTCCTACCTCTTCGTCTCGCACGATCTTTCGGTGGTCGCTGAGATCGCCCATTCCGTGATCGTGATGTATCGCGGCC
GCATCGTCGAGCGCGGCCGGGTCGACGAGCTCTTCCGCAATCCGAAGCACCCCTACACACGCGCGCTGCTTTCGGCGGTT
CCGATCCCAGACCCGAGGACGGAGCGTCGGCGCGAGCGGATCGTCTTCAATAGCGACACCCTTGCCAGCCCGATCACGCC
GGTCGAACGGACCGGAATGTGGCGGCGTCTTTTTGGCGGCAGAACCCAGGAGGCCTCTTAA

Protein sequence :
MSESVHIAGGTGAPLVSVSGLTVSFDRHREEPIEAVRDVSWSIGSGEVLALVGESGSGKSVSALAVMGLLPRNARVAGSI
RWRGEELLGASEKRRRALRGSRIGLVPQDPMTSLNPVYTIGAQIREGIRAHQKLSEREMAERTLELLETMGIPHARERMN
SYPHELSGGMRQRVVIAMAMANNPDLIIADEATTALDVTVQAQVLDALKKAQALTGAALLLITHDLGVVAGRADRVAVMQ
RGEVVEQGTVDEIFYQPASSYTRKLLHSIPRLNHTPDLSAPSDVAPDAEVIHSAFERKVGAEGAPILSMRNVGKHFPVYS
RGVIRGRVGVIKAVAGVDLDVEAGTTLGIVGESGSGKTTLIRSLFNLEPITHGTILFDGQDVHRMPPRDRRRMRKCVQMV
FQDPYASLDPMMTVRDILMEPAVINRMDRKLAERRVMELLERVHLKPEHAARYPNEFSGGQRQRIAIARALMLYPRLLVL
DEPVSSLDVSIQAEVLTLLKELQKDLNLSYLFVSHDLSVVAEIAHSVIVMYRGRIVERGRVDELFRNPKHPYTRALLSAV
PIPDPRTERRRERIVFNSDTLASPITPVERTGMWRRLFGGRTQEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-103 46
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-75 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-75 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-75 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-75 44