Gene Information

Name : Meso_0136 (Meso_0136)
Accession : YP_672706.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 166274 - 167092 bp
Length : 819 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: bsu:BG14034 putative iron(III) dicitrate transport system ATP-binding protein

DNA sequence : 
ATGGATAAGGCGCTCAGCGGATTAAAGGTCGACACGCTTTCGGTAGCCTATGGCGCGCATCTCGCCGTCGATGCCATTTC
GCTTACCATCCCGAAGGGCAAGATCACGGTCCTCGCGGGGCCGAACGGCTGCGGGAAGTCGACGCTGCTGCGCGCGATTC
GCAGGCTTCATGCGGCCAAGACGGGGCGGGTGCTCTTGGGTGAAACCGATATCGGAAAGATGAGGGAGAAGGAGATCGCG
CGCGAGATCGGGCTTCTGGCGCAATCGCCTTCCGCGCCGGAGGACATGCGGGTGGAGGAGCTGGTGCGGCTCGGCCGATA
TCCGCATCAGGCAATGCTTCAGCCCTGGAGCAAGGATGATGCCGCTGCGGTGGAAGATGCCATGTTCGGCACCGGTGTCG
GGCATTTGCGGGACCGGCGGCTGGGCTCGCTTTCTGGCGGGCAGCTTCAGCGTGCCTGGATCGCAATGGTGCTGGCGCAG
CAGACCGACATCGTCTGCCTCGACGAGCCGGTGAATCATCTCGACATGGCGCACCAGATCGACTGCCTCGATCTCGTCAG
CCGGTTGAACCGGGAGCATGGGCGAACGGTGGTGCTTGTGCTGCATGATCTAAACCTCGCCGCCCGCTATGCCGATCTTC
TCGTTTTCATGAAGGATGGCGGAATTGTCAGTGCCGGCTCTCCCCACCAATTGATGACGGAGGAACAGATCGCTTCCGTT
TTCGGCATCCAGTGTCGTGTGATTGAAGACCCTGTGCACGACCGCCCGCTCTGCATCCCCATGCGGAACTCCTCGCCTCG
GTTCGAAGTGCAGGGCTGA

Protein sequence : 
MDKALSGLKVDTLSVAYGAHLAVDAISLTIPKGKITVLAGPNGCGKSTLLRAIRRLHAAKTGRVLLGETDIGKMREKEIA
REIGLLAQSPSAPEDMRVEELVRLGRYPHQAMLQPWSKDDAAAVEDAMFGTGVGHLRDRRLGSLSGGQLQRAWIAMVLAQ
QTDIVCLDEPVNHLDMAHQIDCLDLVSRLNREHGRTVVLVLHDLNLAARYADLLVFMKDGGIVSAGSPHQLMTEEQIASV
FGIQCRVIEDPVHDRPLCIPMRNSSPRFEVQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-59 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-54 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-54 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-49 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-45 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-44 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0136 YP_672706.1 ABC transporter BAC0164 Protein 1e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_0136 YP_672706.1 ABC transporter VFG0925 Protein 2e-61 48
Meso_0136 YP_672706.1 ABC transporter VFG1042 Protein 1e-49 45