Gene Information

Name : Meso_1310 (Meso_1310)
Accession : YP_673871.1
Strain : Chelativorans sp. BNC1
Genome accession: NC_008254
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1400460 - 1402094 bp
Length : 1635 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: mlo:mlr1190 probable ATP-binding component of ABC transporter

DNA sequence :
ATGAGCCTGCTCCAGATCGAAAAGCTGACGCTCTCGATCGGCGGATCGCAGATCCTCAGGAGCATCGACATTTCGATAGA
GCCGGGCGAAATCATGGGCCTGGTGGGCGAATCAGGCTCCGGCAAGTCCATGACGGCGCTCAGCATCATGAAGCTTCTGC
CGCCTGGCGCACGGGCGGGCGGCCGCGTGCAGTTCGACGGCATCGACATCCTCTCCGCGCCTGAAGCCGCCATGTGCCGG
CTGCGCGGGGACGACATCGGCATGATTTTTCAGGAACCGATGACGGCGCTCAACCCGGTGAAGACCATCGGCCAGCAGGT
GGCCGAAGGAATCCGCTGGCACACGGGCGCGAACAGGGCAGACGCAGAGAGCCGCGCCCGCGCCATGCTCGAACGCGTGG
GACTGCCCGAAAAGGAATTCCCCCTCACCCGCTATCCGCACGAGCTTTCGGGCGGACAGCGCCAGCGCGTCGTGATCGCC
ATCGCCTGCGCGCTCAAGCCGAAGCTTCTGATCGCGGATGAGCCGACCACGGCGCTCGACGTGGTGCTGCAGAGGCAGAT
TCTGACGCTCTTACGCGAGCTGGTGAACGAAAGCGGCATGAGCCTGCTTCTCATCTCGCATGATCTGGCGGTCGTGGCGG
AAATGACGGACCGCCTGACGATCATCCGCGATGGCGCCGTGATGGAGGCGGGTGAAACGGTCCAGATCCTCTCGCGGAAA
ACACATCCTTATACGAGGCAACTTGCGGAAGCCTCCACTCACGTCCCGGCGCGGGTGGCGATTTCCAAACCGGGCGCCGG
GCCGTCTGCCGCACCCCTCCTCGAAGTGGAGGGCCTGACGCGCGACTATCCCGTACGCCCTGCCGGTCTTTTTGCACGGG
CAAGCAGGTTCCGCGCCGTGGACCATGTCTCCTTCTCGATTTTCCCTGGCCAGAGCGTCGCTCTCGTCGGCCGCTCCGGT
TGCGGGAAATCGACACTGGCCCGAATGATTCTGGCGCTTGATCGGCCAAGTTCAGGCTCCATCCGCTTTATGGGCCAGGA
GATCGGCGGAAGAAGCGAGGAAGCGCTGCGGCCCGCGCGCCGCAACATGCAGGTGGTCTTTCAGGACCCCTACGGCTCTT
TCGACCCGCGTCATCGCGTGGAAAGGCTAGTGGCCGAGCCTCTGCATCTTGCCGACGAGAAACCGGGTGCGGCGCGCCGG
CGCGATCTGGTCGCCGAGGCGCTGGAGCAAGTCGGCCTTTCGCCCTTGGACATCGACAAATATCCGCATGAGTTCTCAGG
CGGTCAGCGGCAGCGCCTCGCCATCGCCCGCGCGATTATCACCAGGCCGAAGCTCATCGTCGCCGACGAGCCCGTTTCCG
CGCTTGACGTTTCGATCAGGGCGCAGATCCTCGATCTTTTCGCGGACCTCAACGACCGGCTGGGGGTCGCCTATCTCTTC
ATAACGCATGATCTAAGGGTTGCCCGCGCGATCACCGACACGGTGCTGGTGATGCACGAGGGAAAAATCGTCGAGACGGG
GCCGACGGAAATCGTCCTGGACAATCCCAGGAGCGATGCGGCCCGCGCGCTTTTGGCCGCCGCTCCCGACCTCGGGCTGA
CCCTGCGAAAACGTCTCGCGCAGGATACGGGTTGA

Protein sequence :
MSLLQIEKLTLSIGGSQILRSIDISIEPGEIMGLVGESGSGKSMTALSIMKLLPPGARAGGRVQFDGIDILSAPEAAMCR
LRGDDIGMIFQEPMTALNPVKTIGQQVAEGIRWHTGANRADAESRARAMLERVGLPEKEFPLTRYPHELSGGQRQRVVIA
IACALKPKLLIADEPTTALDVVLQRQILTLLRELVNESGMSLLLISHDLAVVAEMTDRLTIIRDGAVMEAGETVQILSRK
THPYTRQLAEASTHVPARVAISKPGAGPSAAPLLEVEGLTRDYPVRPAGLFARASRFRAVDHVSFSIFPGQSVALVGRSG
CGKSTLARMILALDRPSSGSIRFMGQEIGGRSEEALRPARRNMQVVFQDPYGSFDPRHRVERLVAEPLHLADEKPGAARR
RDLVAEALEQVGLSPLDIDKYPHEFSGGQRQRLAIARAIITRPKLIVADEPVSALDVSIRAQILDLFADLNDRLGVAYLF
ITHDLRVARAITDTVLVMHEGKIVETGPTEIVLDNPRSDAARALLAAAPDLGLTLRKRLAQDTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-86 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-94 43