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Name : Meso_0111 (Meso_0111) Accession : YP_672681.1 Strain : Chelativorans sp. BNC1 Genome accession: NC_008254 Putative virulence/resistance : Virulence Product : export protein FliQ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 139277 - 139516 bp Length : 240 bp Strand : + Note : PFAM: export protein FliQ, family 3; KEGG: dvu:DVUA0103 type III secretion protein, HrpO family DNA sequence : ATGGCGCGCAACGCCATTGTCCTGGTCTTTTATCTGTCCATGCCGCTGATCATCGCCGCCACGGTGGTTGGACTGATGGT GGCGATTGTCCAGACGCTGATCCAGCTCCAGGAGCAAACGGTTGCCTTCGCGGCGAAACTGACTGCCGTGGTGCTGATCC TGTCCTTTTCCATCGGAGGAATGTCATCCCATTTGCTGAGTCTTTTCGAGCAGGTGATGAACGAGATCTTGAGGATCTGA Protein sequence : MARNAIVLVFYLSMPLIIAATVVGLMVAIVQTLIQLQEQTVAFAAKLTAVVLILSFSIGGMSSHLLSLFEQVMNEILRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 5e-04 | 44 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 5e-04 | 44 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 5e-04 | 44 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 5e-04 | 44 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 5e-06 | 41 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 0.041 | 41 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 0.041 | 41 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 0.029 | 41 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 0.042 | 41 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 0.042 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Meso_0111 | YP_672681.1 | export protein FliQ | VFG0550 | Protein | 1e-04 | 44 |
| Meso_0111 | YP_672681.1 | export protein FliQ | VFG0395 | Protein | 1e-06 | 43 |
| Meso_0111 | YP_672681.1 | export protein FliQ | VFG0520 | Protein | 0.012 | 41 |
