Gene Information

Name : ECP_4651 (ECP_4651)
Accession : YP_672488.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4849611 - 4850267 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCATGGCAATGATGGTTGCCGGACGCGCTGAAGCGGGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCGGCAGG
GCAAAAACAAGTGCAACTTGCCGTGACAAATAATGATGAAAATAGCACCTATTTAATTCAATCATGGGTAGAAAATGCCG
ATGGTGTAAAGGATGGCCGTTTTATCGTGACGCCACCTCTGTTTGCGATGAAGGGAAAAAAAGAGAATACCTTGCGTATT
CTTGATGCAACAAATAACCAATTGCCACAGGATCGGGAAAGTTTATTCTGGATGAATGTTAAAGCGATTCCGTCAATGGA
TAAATCAAAATTGACTGAGAATACGCTACAGCTCGCAATTATCAGCCGCATTAAACTGTACTATCGTCCGGCTAAATTAG
CGTTGCCACCCGATCAGGCCGCAGAAAAATTAAGATTTCGTCGTAGCGCGAATTCTCTGACGCTGATCAACCCGACACCC
TATTACCTGACGGTAACAGAGTTGAATGCCGGAACTCGGGTTCTTGAAAATGCATTGGTGCCTCCAATGGGCGAAAGCGC
GGTTAAATTGCCTTCTGATGCAGGAAGCAATATTACTTACCGAACAATAAATGATTATGGCGCACTTACCCCCAAAATGA
CGGGCGTAATGGAATAA

Protein sequence : 
MFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRI
LDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTP
YYLTVTELNAGTRVLENALVPPMGESAVKLPSDAGSNITYRTINDYGALTPKMTGVME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-84 84
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 5e-70 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4651 YP_672488.1 chaperone protein FimC VFG0875 Protein 4e-99 99
ECP_4651 YP_672488.1 chaperone protein FimC VFG0911 Protein 2e-70 66
ECP_4651 YP_672488.1 chaperone protein FimC VFG1644 Protein 3e-70 66
ECP_4651 YP_672488.1 chaperone protein FimC VFG0445 Protein 5e-53 49
ECP_4651 YP_672488.1 chaperone protein FimC VFG0455 Protein 8e-40 41