Gene Information

Name : ECP_4633 (ECP_4633)
Accession : YP_672470.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4835384 - 4835752 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACACTCTCCCCGGGACAACGCATCCCGACGATAACAACGACCGCCCCTGGTGGGGGCTACCCTGCACCGTGAC
GCCCTGTTTTGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCAGACCGCGCCGGTATCAGAGGCCGGT
TCAGCGACGCGGATGCGTACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAAGGCTGACCTGCGAAGCCGACACCCTCGGCAGTTG
TGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAA

Protein sequence :
MSDTLPGTTHPDDNNDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKRLTCEADTLGSCGYVYMAVYPTPETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 1e-54 100
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-51 96
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 7e-52 95
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 2e-51 95
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-51 95
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-51 95
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 4e-51 94
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 8e-51 94
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 8e-51 94
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 8e-50 93
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-50 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 5e-49 92
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 6e-48 92
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-48 92
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-48 91
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-48 91
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 1e-48 90
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-48 89
unnamed AAL57576.1 unknown Not tested LEE Protein 2e-48 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4633 YP_672470.1 hypothetical protein VFG1619 Protein 6e-55 100
ECP_4633 YP_672470.1 hypothetical protein VFG0662 Protein 2e-51 94
ECP_4633 YP_672470.1 hypothetical protein VFG1681 Protein 2e-49 92
ECP_4633 YP_672470.1 hypothetical protein VFG1068 Protein 1e-48 89