Gene Information

Name : ECP_4629 (ECP_4629)
Accession : YP_672466.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4833111 - 4833929 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATCCGTCGGGAGCGCCCACTGACACGCGAAGAACTGATGTACCA
CGTCCCGAGTATTTTTGGAGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATCACCGTCCTGG
AAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCAGAGCCGCCGGGAATATACC
AAACATATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTGCCTGAAATTATTCTGCTCAACTCCCATGA
CGGTTCATCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATTTGTACCAATGGCCTGGTCTGCGGTCAGTCGCTGG
GAGAAGTCCGGGTGCCACACCGGGGAAACGTGGTGGACAGGGTCATAGAAGGTGCTTACGAAGTGGTGGGCGTGTTTGAC
CTGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGATGAACATCAGCCCGTCACCACTACCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGCTCGCAGTGCCAGAGGAAAA
CGTATCCATACCCGGGCCATTCACAGCATCGATACCGACATTAAGCTCAACCGGGCGTTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
LIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTTDILTPRRREDYGKDLWSAYQTIQENMLKGGISARSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 5e-120 100
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-118 99
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-116 96
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-113 95
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-113 95
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-109 91
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 5e-108 91
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-108 90
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-109 90
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-108 90
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-108 90
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-109 90
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-109 89
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-109 89
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-109 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 7e-71 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4629 YP_672466.1 hypothetical protein VFG1615 Protein 3e-120 100
ECP_4629 YP_672466.1 hypothetical protein VFG1526 Protein 7e-119 99
ECP_4629 YP_672466.1 hypothetical protein VFG1676 Protein 3e-108 91
ECP_4629 YP_672466.1 hypothetical protein VFG0658 Protein 9e-110 89