Gene Information

Name : ECP_4540 (ECP_4540)
Accession : YP_672377.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : protein PapH
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 4752850 - 4753437 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence : 
ATGAGGCTGCAATTCTCTGCTCTGTTTTTCTTTCTTTACTGTGTGTTTATCCGTGGTGTTTTTGCTGATCCGTTTCCTCC
GCCCGGCATGTCCCTTCCTGAATACTGGGGAGAAGAACACGTATGGTGGGACGGCAGGGCTGCTTTTCATGGTGAGGTTG
TCAGACCTGCCTGTACTCTGGCGATGGAAGACGCCTGGCAGATTATTGATATGGGGGAAACCCCGGTACGAGATTTACAG
AATGGTTTTTCCGGACCTGAAAGAAAATTCAGCCTACGGCTCAGGAACTGTGAATTTAACAGTCAGGGTGGAAACCTTTT
CTCTGATTCCCGGATAAGGGTGACTTTCGATGGTGTCCGGGGTGAAACGCCGGATAAGTTTAATTTATCCGGTCAGGCAA
AAGGCATTAATCTGCAGATAGCTGATGCCAGGGGAAATATTGCCCGGGCAGGGAAAGTAATGCCTGCAATACCATTGACG
GGTAATGAAGAAGCGCTGGATTACACCCTCAGAATTGTGAGAAACGGAAAAAAACTTGAAGCCGGAAATTATTTTGCCGT
GCTGGGATTCCGGGTCGATTATGAGTGA

Protein sequence : 
MRLQFSALFFFLYCVFIRGVFADPFPPPGMSLPEYWGEEHVWWDGRAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQ
NGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADARGNIARAGKVMPAIPLT
GNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 8e-89 100
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 2e-84 96
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 2e-84 96
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 1e-84 96
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 5e-84 95
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 1e-78 91
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 9e-79 91
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 1e-59 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4540 YP_672377.1 protein PapH VFG1549 Protein 3e-89 100
ECP_4540 YP_672377.1 protein PapH VFG0894 Protein 5e-85 96
ECP_4540 YP_672377.1 protein PapH VFG0883 Protein 5e-85 96