Gene Information

Name : ECP_4525 (ECP_4525)
Accession : YP_672362.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : OmpA family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 4742430 - 4743170 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAAGGTTTTTGTTGTTTCAGTGGTGGCCGCAGCCTGTGTATTTGCAGCAAATGCAGGAGCAAAGGAAGGTAAAAG
TGGTTTTTATCTGACCGGTAAAGCCGGTGCCTCTGTGGTGTCACTTTCAGACCAGCGTTTCCTGTCAGGAGATGAGGAAG
AAACATCAAAGTATAAAGGCGGCGATGACCATGATACGGTATTCAGTGGCGGTATTGCGGCCGGTTATGATTTTTATCCG
CAGTTCAGTATTCCGGTTCGTACAGAACTGGAGTTTTACGCTCGTGGAAAAGCTGATTCGAAGTATAACGTAGATAAAGA
CAGCTGGTCAGGTGGTTACTGGCGTGATGACCTGAAGAATGAGGTGTCAGTCAACACACTAATGCTGAATGCGTACTATG
ACTTCCGGAATGACAGCGCATTCACACCATGGGTATCCGCAGGGATTGGCTACGCCAGAATTCACCAGAAAACAACCGGT
ATCAGTACCTGGGATTATGAGTACGGAAGCAGTGGTCGCGAATCGTTGTCACGTTCAGGCTCTGCTGACAACTTCGCATG
GAGCCTTGGCGCGGGTGTCCGCTATGACGTAACCCCGGATATCGCTCTGGACCTCAGCTATCGCTATCTTGATGCAGGTG
ACAGCAGTGTGAGTTACAAGGACGAGTGGGGCGATAAATATAAGTCAGAAGTTGATGTTAAAAGTCATGACATCATGCTT
GGTATGACTTATAACTTCTGA

Protein sequence : 
MNKVFVVSVVAAACVFAANAGAKEGKSGFYLTGKAGASVVSLSDQRFLSGDEEETSKYKGGDDHDTVFSGGIAAGYDFYP
QFSIPVRTELEFYARGKADSKYNVDKDSWSGGYWRDDLKNEVSVNTLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTG
ISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIML
GMTYNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hek CAD42020.1 adhesin/virulence factor Hek Virulence PAI II 536 Protein 2e-88 100
tia AFX83958.1 tia invasion determinant Not tested SE-PAI Protein 2e-62 66
tia AAZ04415.1 Tia invasion determinant Virulence PAI I APEC-O1 Protein 3e-59 64
tia YP_854245.1 tia invasion determinant Virulence PAI I APEC-O1 Protein 4e-59 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4525 YP_672362.1 OmpA family protein VFG1539 Protein 9e-89 100