Gene Information

Name : ECP_4524 (ECP_4524)
Accession : YP_672361.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 4740756 - 4742255 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGAATATCAGAAAACTGTTTTGTCCGGGCAACACACCACGGATTTTATTGTTTTTATTCTTTTTTGTTGTTTCTGTCAT
AACCACAATTGCATGCGGATACACTGAGAAGAATACCACCGGGAATGTGTTGCTGCTGTTCTTTCTTCTGCTTCTTGCAC
ACAGAAATACCCTCATATCCATTACAGCGCTGTTATTTCTGTTCTGTTGTGCACTGTATGCGCCTGCCGGTATGACGTAC
GGTAAAATCAACAACAGTTTTATTGTCGCGTTGTTGCAGACCACAACTGATGAGGCAGCGGAGTTTACCGGGATGATTCC
TGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTATTCATGGTGATTTTCTGGCGAACACACCACCGCGGTCACCGTA
ACTGGCTGGCACTGCTGCTGTTCGTATTATGCTCAGTAAACAGCTGGCCGTTGCGGATGGTTAAAGGAACTGTTGTGGGG
ACAACTGACACATTGCGTGAAATGCAGCGTTATAAACAACTGAATCAGCACGGGGCTGACAACTGGAAAATCCTGCCGGG
TGTACCGTTGTATGACACGATTGTTATCGTCACTGGTGAGAGTGTGCGCAGGGATTATATGTCGGTATATGGCTATCCCG
TGCCAACCACACCGTGGCTGAATACTGCTCCCGGTTTATTTATTGACGGCTATACATCGGCAGCAGCCAGTACCGTACCT
TCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGACTCCGGCAACAACGTGGTGGCGCTGGCAGCAAAAGC
AGGATACAGCACATGGTGGATATCCAATCAGGGAAAGCTGGGGGAGCATGATACACGCATCTCTGTTATTGCTTCAGATG
CGGAGCATACCGTTTTCCTCAAGAAAGGCAGCTTTGCTTCCCGTAAAACGGATGACATGTTGTTGTTACAGGAAACAGAA
CGTGCACTGGCGGATAAATCCTCTCCGAAGGTGATATTCCTGCACATGATGGGGTCTCATCCGAACCCGTGTGACCGGCT
TCACTCCTGGCCGAATAATTACCAGGAGCAGTTCCCCCGGAAGATTGCCTGTTACCTCGCCAGCATCAGTAAACTGGATA
ACTTTCTCGGGCAGCTTGATGGTATCCTTCGCCGGCATTCCCGTCATTTTGCCATGCTTTACTTTTCTGACCATGGTCTG
TCGGTCAGCGACAGTGCTAATCCTGTTCATCATGATGGTCATGTGCAGGGAGGCTACAGCGTTCCCCTGATTATTACCGC
CAGTGACATCACGTCTCATCAGTCCGTCAGCAGAAAAATCAGTGCCCGTCATTTCGCAGGTATTTTTCAGTGGCTGACCG
GCATTCGTACTGAAAATATACCGCCATTCAATCCGCTGACAGACGAAGATAATGAACCCGTTATGGTTTTTAACGGGGAG
AGGAATGTACCGGCAGACAGTCTGAAACCGCAGCCTCTGATTCTTCCGGACAGAAGATAA

Protein sequence :
MNIRKLFCPGNTPRILLFLFFFVVSVITTIACGYTEKNTTGNVLLLFFLLLLAHRNTLISITALLFLFCCALYAPAGMTY
GKINNSFIVALLQTTTDEAAEFTGMIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVG
TTDTLREMQRYKQLNQHGADNWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAPGLFIDGYTSAAASTVP
SLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETE
RALADKSSPKVIFLHMMGSHPNPCDRLHSWPNNYQEQFPRKIACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGL
SVSDSANPVHHDGHVQGGYSVPLIITASDITSHQSVSRKISARHFAGIFQWLTGIRTENIPPFNPLTDEDNEPVMVFNGE
RNVPADSLKPQPLILPDRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjgX CAD42019.1 hypothetical protein Not tested PAI II 536 Protein 0.0 100
APECO1_3531 YP_854244.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 99
ORF_3 AAZ04414.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 99
unnamed AFX83957.1 sulfatase family protein Not tested SE-PAI Protein 0.0 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_4524 YP_672361.1 hypothetical protein VFG1538 Protein 0.0 100