Gene Information

Name : sgaE (ECP_4443)
Accession : YP_672285.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 4653227 - 4653913 bp
Length : 687 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCAAAAGCTGAAACAGCAGGTGTTTGAAGCCAACATGGATTTACCGCATTACGGGTTGGTGACCTTTACCTGGGGCAA
CGTCAGCGCTATTGACCGTGAACGCGGGCTGGTGGTGATCAAGCCCAGCGGTGTCGCCTACGAAACCATGAAAGCGGACG
ATATGGTAGTGGTCGATATGAGCGGCAACGTGGTGGAAGGGGAGTATCGTCCGTCTTCCGACACTGCGACGCATCTCGAA
CTCTACCGTCGTTATCCGTCGCTTGGTGGTATTGTCCATACCCACTCCACTCATGCCACCGCATGGGCGCAGGCGGGGCT
GGCGATCCCGGCGTTAGGCACCACGCACGCCGATTACTTCTTTGGCGATATCCCGTGTACGCGTGGGTTAAGTGAAGAAG
AAGTGCAGGGCGAATACGAGCTAAACACTGGCAAAGTGATTATCGAAACGCTGGGTGACGCCGAGCCGCTGCATACGCCG
GGAATTGTGGTGTATCAGCACGGACCGTTCGCCTGGGGGAAAGATGCCCACGATGCGGTGCATAACGCGGTGGTGATGGA
AGAAGTGGCGAAAATGGCGTGGATTGCGCGCAGTATTAACCCACAACTGAATCACATCGACAGCTTTCTGATGAATAAAC
ACTTCATGCGTAAGCACGGTCCTAACGCTTATTACGGGCAGAAGTAA

Protein sequence :
MQKLKQQVFEANMDLPHYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDMSGNVVEGEYRPSSDTATHLE
LYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-63 56