Gene Information

Name : ECP_3862 (ECP_3862)
Accession : YP_671734.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4023701 - 4024546 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGACATCACCATCTCCCGTCCGGAAGTGCTCAATGGACATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTGCGCTGCTGCAAATCGACACACTTATCCGGCAACTGGCAGAAATCTCAGTACTGACAGAAA
GTATTGGAGGTAAAACCGCCCTGGACTGGGCGATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGAGAAACCTGAA
ACCGCAATGAAAGCTATCACACGCAATCTCGATCGTGAAATCTGGCGTGACCTGATACAACGTTCCGGGATGCTTTCCTT
AATGGATGCACAGGCCCGTGATACATGGTACCGGTCACTGGAATATGATAATTTTCCGGAAATCAGCGAGGCGAATATCC
TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTACAAAACCAATTGCCCCTGCAAATTTGGCAGTAAAATTATCGTCAACAACCTAGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGGCAGATCGACTTGCCGATCTGGAAAGAATGCTACACCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACCCTTCGTCTGGATGATCACATCCAGTCCGTTCAGGGTAAAGAGTGCTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAAAAATCAAGAACTGGTTGACAGGCTGAA
TGACATTATTGCAAGACACTATCCGGGAATGTTACCTTCATTATAA

Protein sequence :
MSDITISRPEVLNGHTDVICSTSIRHILAVRKSALLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLIQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKECYED
EMFSIRYFKKGSAHITFKNQELVDRLNDIIARHYPGMLPSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-131 100
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-125 95
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-125 95
unnamed AAL57572.1 unknown Not tested LEE Protein 5e-122 94
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 8e-121 93
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-122 92
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-121 91
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-121 91
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-122 91
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 5e-120 89
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 7e-120 89
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 7e-120 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-121 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-121 89
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-109 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3862 YP_671734.1 hypothetical protein VFG1533 Protein 2e-131 100
ECP_3862 YP_671734.1 hypothetical protein VFG0666 Protein 3e-120 89
ECP_3862 YP_671734.1 hypothetical protein VFG1685 Protein 2e-109 87