Gene Information

Name : ECP_3858 (ECP_3858)
Accession : YP_671730.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4022100 - 4022468 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTACCCTGCACCGTGAC
GCCCTGTTTCGGCGCCCGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGTGCCGGTATCAGAGGCCTGT
TCAGCGATGCAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGTGCTCATGCTCACCAGTGGT
GAACTCAGCCCCCGCATACAGCATACCGTCACGCTGTATGCGAAAGGACTGACCTGCGAAGCCGACACCCTCGGCAGTTG
TGGTTACGTTTATCTGGCTTTTTATCCAACATCCGAAACGAAAAAGTAA

Protein sequence :
MSDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLVLMLTSG
ELSPRIQHTVTLYAKGLTCEADTLGSCGYVYLAFYPTSETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 5e-50 93
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 6e-49 92
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-49 92
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-48 92
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 8e-49 91
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 4e-48 91
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 3e-48 91
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 3e-48 91
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 6e-48 91
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-48 91
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-48 91
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 5e-48 91
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 4e-48 90
Z1220 NP_286755.1 structural protein Not tested TAI Protein 3e-46 89
Z1658 NP_287161.1 structural protein Not tested TAI Protein 3e-46 89
unnamed AAL57576.1 unknown Not tested LEE Protein 9e-48 89
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 2e-45 88
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 9e-46 88
unnamed AAL08477.1 unknown Not tested SRL Protein 8e-46 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3858 YP_671730.1 hypothetical protein VFG1681 Protein 1e-49 92
ECP_3858 YP_671730.1 hypothetical protein VFG1619 Protein 3e-49 92
ECP_3858 YP_671730.1 hypothetical protein VFG0662 Protein 8e-49 91
ECP_3858 YP_671730.1 hypothetical protein VFG1068 Protein 3e-46 86