Gene Information

Name : ECP_3850 (ECP_3850)
Accession : YP_671722.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4016935 - 4017819 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
ATGCCATTCAGCAATTCTTCCCTCTCCGCGCAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCACGGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGTC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGCCTCACC
CTGCAGATTGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAAACACCGCAGCATGATCAGGAATACCG
GACACTTTATCGTCAGCTGCTACCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCTGCTG
ATATTGCCATGCATCAGTTTTTACTGAATGAAGGTGCCGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAACGACACAGAAAAATGCCCGTCCCGTCAGCAGGAACTCTCACTGGCAACAGTAACAGC
CCGGGTGGCAACCCTGTTCCCTTCATCATTTCCGGTACTCTCCGTTGCCGCACCTGTCGGCTGGAACCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCACTGCCACCACAGGCAACCAGCGCGGTGTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGACCCAGAAACATGCACAACAGACTTTTGGTGATGCCATCGGGAAAAGTTTTGACGACACCGTTGCCCGGTTCACTTT
TCCGGTCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT
TCTGA

Protein sequence : 
MPFSNSSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQIGERRMTLVDLPGIGETPQHDQEYRTLYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNDTEKCPSRQQELSLATVTARVATLFPSSFPVLSVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QTQKHAQQTFGDAIGKSFDDTVARFTFPVWMLQLLRKARDRIIHLLITLWERLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-138 100
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-135 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 2e-135 95
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-135 95
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-135 95
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 6e-133 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3850 YP_671722.1 hypothetical protein VFG1522 Protein 9e-139 100
ECP_3850 YP_671722.1 hypothetical protein VFG1612 Protein 4e-133 94