Gene Information

Name : ECP_3849 (ECP_3849)
Accession : YP_671721.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4016473 - 4016790 bp
Length : 318 bp
Strand : -
Note : -

DNA sequence :
ATGATCAAAACTCGTTGGACTAAACGTACCTTTTCCCCGGAGTTCAAGCTTGAAGCTATCGAACAGGTGGTTAAATACCC
GCGTGATGTCAGAGAAGTCGCGCTGGCACTTGAGCTCAATCCTGACCATTTGCGTAAATGGATACGGTTGTATAAGCAGG
AATTTCAGGGTATTGAGTCCGCTGGTAATGCTATTACTCCTGAACAACGCGAAATTCAGCAGCTTAAAGCGCAGATAAAG
CGCGTTGAGATGGCAAAAGAAATACTAAAGCAGGCTGCCGTGCTGATGAGCGAAATCCCCGGGAAGCTGCCGCGCTAA

Protein sequence :
MIKTRWTKRTFSPEFKLEAIEQVVKYPRDVREVALALELNPDHLRKWIRLYKQEFQGIESAGNAITPEQREIQQLKAQIK
RVEMAKEILKQAAVLMSEIPGKLPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33780.1 putative transposase Not tested PAI I 536 Protein 5e-45 100
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 8e-40 92
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-12 42
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-12 42
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-12 42
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-12 42
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-12 42
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 5e-12 42
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 5e-12 42
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 4e-12 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3849 YP_671721.1 transposase VFG1521 Protein 2e-45 100
ECP_3849 YP_671721.1 transposase VFG1566 Protein 3e-40 92
ECP_3849 YP_671721.1 transposase VFG1123 Protein 2e-12 42