Gene Information

Name : ECP_3845 (ECP_3845)
Accession : YP_671717.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4014426 - 4014806 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence :
ATGCAGAAAAATGTGACTCCCGGCAGACGAAAAGGCTGCCCTAATTATCCTCCCGAATTTAAACAGCAGCTCGTTGCTGC
CTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCAATCTGTTGTTCAAATGGCGAC
AACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCTGTGACTCTCGATGCAGCTGCC
GAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCTCAGTATCAGCTGTGAGGTAACGTTCCGGCACGGGACGCTCCG
CTTCAATGGCAATGTCAACGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGA

Protein sequence :
MQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAA
EQPESLAEDPETLSISCEVTFRHGTLRFNGNVNEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 6e-47 100
unnamed AAL99257.1 unknown Not tested LEE Protein 8e-47 99
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 8e-47 99
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 6e-47 99
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-46 99
unnamed AAC31492.1 L0013 Not tested LEE Protein 4e-47 99
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-47 99
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 6e-47 99
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-24 53
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 4e-24 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3845 YP_671717.1 transposase VFG1518 Protein 3e-47 100
ECP_3845 YP_671717.1 transposase VFG0791 Protein 2e-47 99
ECP_3845 YP_671717.1 transposase VFG1708 Protein 2e-47 99
ECP_3845 YP_671717.1 transposase VFG1053 Protein 8e-47 99
ECP_3845 YP_671717.1 transposase VFG1697 Protein 1e-24 53