Gene Information

Name : ECP_3798 (ECP_3798)
Accession : YP_671670.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3973972 - 3974538 bp
Length : 567 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTAAATCTTACACACCAAACTGGTTTTTTACCGCTTTACTTGACAATCACATCAATCAAATGATGGCACGCTATTC
CTGCCTGCGGGCCTTACGGATGGATTTCTTCTACAGGAAAGATACGCCTGATTTCTTACAACCTGATCATCGCTGGCTTG
AATTGCAGTTGCGTATGCTGCTGGAGCAGGTGGAACAATTTGAAAATATCGTTGGTTTCTTCTGGGTGATTGAATGGACG
GCTGATCATGGTTTTCATGCGCATGCGGTTTTCTGGATCGATCGTCAGAGGGTTAAAAAAATATATCCCTTTGCGGAGCG
GATTACGGAATGCTGGCGGTCTATTACGCATAACAGCGGTTCGGCACACCGCTGTACATATCAGCCGCATTATACATACA
ACATCAACATTCCTGTGCGCCACAACGATCCTGAAAGCATCGATAATATTCGCGGTGCCCTGCATTATCTGGCGAAAGAA
GAACAAAAAGACGGGCTGTGTGCCTACGGCTGCAATGAAGTTCCTGAACGTCCTGCTGCAGGGCGTCCTCGTAAGCCTCA
CTTCTGA

Protein sequence : 
MPKSYTPNWFFTALLDNHINQMMARYSCLRALRMDFFYRKDTPDFLQPDHRWLELQLRMLLEQVEQFENIVGFFWVIEWT
ADHGFHAHAVFWIDRQRVKKIYPFAERITECWRSITHNSGSAHRCTYQPHYTYNINIPVRHNDPESIDNIRGALHYLAKE
EQKDGLCAYGCNEVPERPAAGRPRKPHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33737.1 hypothetical protein Not tested PAI I 536 Protein 9e-88 100
APECO1_3514 YP_854261.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-84 99
ORF_20 AAZ04430.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-85 99
unnamed CAD42062.1 hypothetical protein Not tested PAI II 536 Protein 2e-85 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3798 YP_671670.1 hypothetical protein VFG1478 Protein 4e-88 100
ECP_3798 YP_671670.1 hypothetical protein VFG1581 Protein 7e-86 97