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Name : sgbE (ECP_3688) Accession : YP_671563.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 3863761 - 3864456 bp Length : 696 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAGCAACTGAAAGCCGACGTGCTGGCGGCAAACCTGGCGCTTCCCGTTCATCATCTGGTGACGTTCACCTGGGG CAATGTCAGCGCGATAGACGAAACGCGGCAATGGATGGTGATTAAGCCTTCCGGCGTTGAGTATGAGGTAATGACCGCCG ACGATATGGTGGTGGTTGAGATAGCCAGCGGCAAGGTGGTGGAAGGCAGCAAAAAGCCCTCTTCCGACACGCCAACGCAT CTGGCGCTTTACCGTCGCTTTGCGGAGATTGGCGGCATAGTGCATACCCACTCGCGCCACGCCACCATCTGGTCGCAGGC CGGACTTGATCTCCCCGCCTGGGGCACTACTCACGCCGATTATTTTTACGGAGCCATCCCCTGCACGCGCCTGATGACCG CAGAAGAGATCAACGGCGAGTATGAATACCAGACCGGCGAAGTGATCATTAAAACCTTCGAAGAGCGTGGGTTGAACCCG GCAAAAATCCCGGCGGTACTGGTGCATTCTCACGGCCCGTTCGCCTGGGGAAAAAATGCCGCCGATGCGGTGCATAACGC CGTGGTACTGGAAGAGTGCGCCTATATGGGTCTGTTCTCGCGCCAGCTTGCGCCACAGCTCCCTGCGATGCAAAACGAAC TGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAG Protein sequence : MLEQLKADVLAANLALPVHHLVTFTWGNVSAIDETRQWMVIKPSGVEYEVMTADDMVVVEIASGKVVEGSKKPSSDTPTH LALYRRFAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIKTFEERGLNP AKIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 8e-59 | 53 |
