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Name : ECP_3413 (ECP_3413) Accession : YP_671294.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3566015 - 3567979 bp Length : 1965 bp Strand : + Note : - DNA sequence : ATGGACAGCGCAATGAAGGGACTCAATAAAATCACCTGCTGCTTGCTGGCAGCACTACTCATGCCTTGTGCAGGACACGC TGAGAACGAACAATACGGCGCTAACTTCAATAACGCCGATATCCGCCAGTTCGTGGAAATAGTGGGTCAGCATCTTGGCA AAACGATCCTGATCGACCCTTCGGTACAGGGAACCATTTCCGTACGCAGTAATGATACGTTTAGCCAACAGGAGTACTAC CAGTTCTTTTTAAGTATTCTTGATCTTTACGGTTATTCCGTGATCACACTGGACAATGGTTTTCTGAAAGTGGTGCGCTC AGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATCG TACCGCTTGAGAACGTTCCTGCTCGTGACCTTGCTCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTT GTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCG CGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCATCAGCGGAAGATCTCGCCGAGATTCTTA ATCAATTAATCAGCGAAAGCCACGGTAAAAGCCAGATGCCTGCCCTCCTTTCCGCGAAGATTGTGGCGGATAAGCGAACC AACTCTCTTATCATCAGCGGGCCGGAAAAAGCACGCCAGCGCATAACTTCATTACTGAAAAGCCTTGATGTAGAAGAGAG CGAGGAAGGAAATACCCGGGTCTATTACCTGAAATATGCTAAAGCCACGAATCTGGTGGAAGTGCTAACCGGTGTTTCCG AAAAGCTGAAAGATGAAAAAGGGAATTCGCGTAAGCCTTCTTCTACTTCTGCGATGGATAATGTGGCCATTACCGCCGAT GAACAGACCAACTCGTTGGTCATTACCGCTGACCAGTCCGTCCAGGAGAAACTCGCCACGGTAATTGCGCGTCTGGATAT TCGCCGTGCACAGGTGCTGGTTGAGGCAATCATCGTCGAAGTTCAGGATGGAAATGGACTCAACCTCGGCGTGCAATGGG CGAATAAAAACGTTGGCGCACAGCAATTTACCAATACGGGATTACCGGTTTTTAACGCTGCGCAAGGTGTAGCTGATTAT AAAAAGAATGGCGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCTGCAGGCTTCTT CAATGGCGACTGGGGCGTATTGTTGACTGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCGAGCATCGTAA CGCTGGATAATAAACTCGCGTCCTTCAACGTTGGTCAGGATGTGCCGGTGCTATCCGGCTCTCAGACCACTTCTGGGGAT AACGTCTTTAATACTGTCGAACGCAAAACGGTGGGCACAAAACTCAAAGTCACTCCGCAGGTCAATGAAGGCGACGCGGT ACTGCTCGAAATAGAGCAGGAGGTTTCCAGCGTTGACTCTTCGTCTAATTCGACGCTCGGCCCGACATTTAACACCCGTA CTATTCAAAACGCCGTGCTGGTTAAAACCGGTGAAACGGTGGTCCTGGGCGGATTGCTGGATGATTTTTCTAAAGAGCAA GTGTCAAAGGTTCCTCTGCTTGGCGATATTCCTTTAGTGGGACAACTCTTCCGCTATACCTCGACCGAGCGCGCTAAACG CAACCTGATGGTATTTATCCGCCCGACGATTATCCGTGACGATGATGTTTATCGCTCACTGTCAAAAGAGAAATACACCC GCTACCGTCAGGAGCAACAGCTGCGAATCGACGGGAAATCAAAAGCGCTGGTTGGCTCGGAAGATTTGCCGGTGCTGAAT GAGAACACGTTCAACAGTCACGCCCCTGCGCCATCGTCACGGTGA Protein sequence : MDSAMKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYY QFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNV VHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNSRKPSSTSAMDNVAITAD EQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPVFNAAQGVADY KKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQ VSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQLRIDGKSKALVGSEDLPVLN ENTFNSHAPAPSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-124 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-131 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECP_3413 | YP_671294.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-121 | 45 |
