Gene Information

Name : ECP_0341 (ECP_0341)
Accession : YP_668274.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 360025 - 360849 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :
GTGGTCAACGGACATACGGACGTTATCGGCTCAACCAGTATCCGCCACATTCTGGCTGTACGACAGAGTACATTGCTGCA
AATCGACACACTTATCCGGCAACTGGCTGAAATCTCAGCAATGACAGTAAGTATTGGCGGTAAAACTGCACTGGACTGGG
CCATGAAACAGGATTTTCGCTGCGGTTTCTGGCTGATGGAGAAACCTGAAATCGCAATGAAAGCCATCACCCGGAATCTC
GATCGCGAACTCTGGCGTGACCTGATGCAACGTTCCGGGATGCTTTCCTTAATGGATGCACAGGCCCGTGAGACATGGTA
CCGGTCACTGGAGTACGATAATGTCCCGGAAATCAGTGAAGCAAACATTCTGAACACATTTAAACAACTGCACCAGAATA
AGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAACTGGAATTACAAAACCAATTTACCCTGCAAA
TTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGGATTTCATATTGTCACCGGACAGCAGGCTGA
CCGGGTTGCTGACCTGGAAAGGATGCTGCACCTGTTCAGCGGCTGGCCCATCCCCGACAACCGGGAAAATATCATCATCC
GTCTGGATGACCACATTCAGTCCGCTCAGGGTCAGGAGTGCTATGAATATGAAGATGAGATGTTCAGCATCAGATACTTT
AAGAAGGGCTCCGCGCACATCACGTTCAGAAAACCGGAACTGATTGATCGGCTAAATGACATCATTGCGAAGTATTATCC
AGAAATAATCCCATACAATATCTAA

Protein sequence :
MVNGHTDVIGSTSIRHILAVRQSTLLQIDTLIRQLAEISAMTVSIGGKTALDWAMKQDFRCGFWLMEKPEIAMKAITRNL
DRELWRDLMQRSGMLSLMDAQARETWYRSLEYDNVPEISEANILNTFKQLHQNKDEVFERGVINVFRGLNWNYKTNLPCK
FGSKIIVNNLVRWDRWGFHIVTGQQADRVADLERMLHLFSGWPIPDNRENIIIRLDDHIQSAQGQECYEYEDEMFSIRYF
KKGSAHITFRKPELIDRLNDIIAKYYPEIIPYNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 9e-128 100
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-109 88
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-109 88
unnamed AAL57572.1 unknown Not tested LEE Protein 7e-108 87
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 4e-107 87
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 3e-109 87
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 3e-106 85
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 3e-106 85
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-107 85
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 6e-107 85
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 2e-107 85
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 2e-107 85
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-108 85
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-108 85
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 9e-108 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0341 YP_668274.1 hypothetical protein VFG1685 Protein 5e-128 100
ECP_0341 YP_668274.1 hypothetical protein VFG1533 Protein 2e-109 87
ECP_0341 YP_668274.1 hypothetical protein VFG0666 Protein 7e-108 85