Gene Information

Name : ECP_0338 (ECP_0338)
Accession : YP_668271.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 358839 - 359216 bp
Length : 378 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACATTACCCGACACACACGTACGGGAGGCATCGCGCTGCCTGTCTCCGGTTGAAATCTGGCAGACACTGCTCAC
CCGGTTACTGGACCAGCACTACGGCCTCACACTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AAGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCCCTGGTGCGTACCGACCAGCCGGGATTC
AGCCCCTGTACCCGCTCTCAGTTAATCAACAGTATCGATATCCTCCGGGCACGCCGGGCAACCGGCCTGATGACCCGCGA
TAACTACAGAACGGTAAATAACATTACCCGGGGTAAGCATCCGGAGGCGAAACAATGA

Protein sequence :
MKTLPDTHVREASRCLSPVEIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
SPCTRSQLINSIDILRARRATGLMTRDNYRTVNNITRGKHPEAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 2e-55 100
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 4e-52 95
unnamed AAL57575.1 unknown Not tested LEE Protein 2e-50 95
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 2e-51 95
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 2e-51 95
unnamed AAC31486.1 L0007 Not tested LEE Protein 1e-51 95
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 1e-51 95
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 3e-50 94
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-51 93
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 1e-50 93
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 4e-51 93
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 2e-51 93
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 2e-50 93
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 2e-50 93
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-50 92
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 3e-49 92
unnamed AAL08478.1 unknown Not tested SRL Protein 1e-49 92
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-49 92
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 4e-50 92
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 4e-50 92
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-48 92
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 1e-47 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0338 YP_668271.1 hypothetical protein VFG1682 Protein 8e-56 100
ECP_0338 YP_668271.1 hypothetical protein VFG0786 Protein 6e-52 95
ECP_0338 YP_668271.1 hypothetical protein VFG1530 Protein 1e-50 94
ECP_0338 YP_668271.1 hypothetical protein VFG1620 Protein 7e-52 93
ECP_0338 YP_668271.1 hypothetical protein VFG0663 Protein 4e-51 93
ECP_0338 YP_668271.1 hypothetical protein VFG1069 Protein 5e-50 92