Gene Information

Name : ECP_0334 (ECP_0334)
Accession : YP_668267.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : anti-restriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 356951 - 357436 bp
Length : 486 bp
Strand : +
Note : -

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACAACTGCATCAGGGAATAACCAGTCTCAACTGGT
TGCCACTCCTGTCCCTGATGAACAGCGCATCAGTTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGCGGGGCATTTATGGCCCCTGAACCGGATGGCGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGACGTACAGCCATCACGCCTGCCGTACGGAGTGTT
ATGTCATGACGGTTCATTATTACCGTCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MTTSSHNSTTPSVSVTTASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDGDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYVMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 3e-65 100
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 1e-58 98
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 4e-59 98
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 4e-59 98
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 9e-57 98
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-63 97
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 6e-57 97
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-57 96
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 1e-62 96
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 1e-56 95
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 1e-56 95
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-57 94
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-57 94
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 7e-62 94
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 1e-62 94
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-57 94
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 9e-61 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0334 YP_668267.1 anti-restriction protein VFG1677 Protein 1e-65 100
ECP_0334 YP_668267.1 anti-restriction protein VFG1527 Protein 5e-64 97
ECP_0334 YP_668267.1 anti-restriction protein VFG1616 Protein 5e-63 96
ECP_0334 YP_668267.1 anti-restriction protein VFG0659 Protein 3e-57 95