Gene Information

Name : ECP_0333 (ECP_0333)
Accession : YP_668266.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 356041 - 356859 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCGATTAGCCAGTCGTTTTGGTTATGCGAACCAGGTACGTCGTGATCGTCCGCTGACACACGAAGAACTGATGCGCCA
TGTACCGAGTATTTTTGGGGAAGACCGACATACCTCCCGCAGTGAACACTATGCGTACATTCCCACTATCACCGTCCTGG
AAAATCTGCAGCAGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCCGCGTACGTGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGCCTGCGCCGTAACGGGGAGATAAACGGACAACATGTCCCTGAAATTATTCTGCTCAACTCCCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGATTCGTCTGCCAGAACGGCTGCGTCTGCGGTCAGTCTCTGG
GGGAAGTCCATGTGCCCCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTCACGAGGTAGTGGGCGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCTCTGGTTCTGCCGCCACCGGCACGTCAGGCACTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGATGAACATCAACCCGTCACCACTGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGCCGTAGTGCAAAAGGAAAA
CGTATCCATACCCGCGCCATTCACAGTATCGACACCGACATCAAGCTCAATCGCGCATTGTGGGTGATGGCGGAAACGCT
GCTGGAGAGCATGCGCTGA

Protein sequence :
MRLASRFGYANQVRRDRPLTHEELMRHVPSIFGEDRHTSRSEHYAYIPTITVLENLQQEGFQPFFACQTRVRDPGRRGYT
KHMLRLRRNGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVHVPHRGNVVDRVIEGAHEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-121 100
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-114 95
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-114 95
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-115 95
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 5e-116 95
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 5e-116 95
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 5e-116 95
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-113 93
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-113 93
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 9e-116 93
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 9e-116 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-113 92
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-109 92
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 5e-108 91
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-110 91
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-70 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-70 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0333 YP_668266.1 hypothetical protein VFG1676 Protein 2e-121 100
ECP_0333 YP_668266.1 hypothetical protein VFG0658 Protein 4e-116 93
ECP_0333 YP_668266.1 hypothetical protein VFG1526 Protein 9e-110 92
ECP_0333 YP_668266.1 hypothetical protein VFG1615 Protein 3e-108 91