Gene Information

Name : ECP_0321 (ECP_0321)
Accession : YP_668254.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 341225 - 341572 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence :
ATGATATCTCTCCCTGCAGGTTCGCGTATCTGGCTGGTTGCCGGTATCACCGATATGCGAAATGGCTTTAACGACCTGGC
ATCAAAAGTTCAGAACGTCCTGAAGGATGACCCGTTCTCCGGACACCTGTTTATCTTCCGCGGACGCCGGGGTGACCAGA
TAAAAGTGCTGTGGGCTGACAGTGACGGACTGTGCCTCTTCACCAAACGCCTGGAGCGGGGCCGCTTCGTCTGGCCGGTC
ACCCGCGATGGAAAGGTTCACCTTACTCCGGCTCAGTTGTCCATGCTTCTTGAGGGCATCAACTGGAAGCACCCGAAACG
AACGGAACGCGCTGGAATCCGTATATAA

Protein sequence :
MISLPAGSRIWLVAGITDMRNGFNDLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPV
TRDGKVHLTPAQLSMLLEGINWKHPKRTERAGIRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 4e-50 100
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 9e-50 99
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 9e-50 99
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-44 81
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-44 81
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-39 76
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 3e-39 76
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-30 75
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-38 75
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 1e-38 75
unnamed AAC31493.1 L0014 Not tested LEE Protein 7e-39 75
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 1e-38 75
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 6e-38 75
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 7e-39 75
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 1e-38 75
unnamed AAL99258.1 unknown Not tested LEE Protein 7e-39 75
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 6e-38 75
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 7e-39 75
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-38 74
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-38 69
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-38 69
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 2e-37 68
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 2e-37 68
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-38 68
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-30 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_0321 YP_668254.1 transposase VFG1665 Protein 2e-50 100
ECP_0321 YP_668254.1 transposase VFG1698 Protein 8e-40 76
ECP_0321 YP_668254.1 transposase VFG1517 Protein 2e-30 75
ECP_0321 YP_668254.1 transposase VFG1709 Protein 3e-39 75
ECP_0321 YP_668254.1 transposase VFG0792 Protein 3e-39 75
ECP_0321 YP_668254.1 transposase VFG1052 Protein 5e-39 74
ECP_0321 YP_668254.1 transposase VFG1737 Protein 1e-38 68