Gene Information

Name : ECP_3035 (ECP_3035)
Accession : YP_670919.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 3194876 - 3195544 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAAATTGAAAGTTTAACTAAATCATATCGTACGCCAAAAGGGCGGCATTATGTTTTTAAAAATTTAAGTATTGA
ATTTCCTACAGGGAAAAGTATTGCGCTTATAGGCCGCAATGGAGCAGGAAAGTCTACTCTTTTACGAATAATTGGAGGTA
TAGATCGTCCTGACAAAGGGGAAATAATAACTCAAAAAACAATATCGTGGCCTGTTGGCCTTTCAGGCGGTTTTCAAGGA
AGTCTGACAGGACGAGAGAATGTGAAATTTGTTGCTAGATTATATTCAAGGAAAAATGAGCTACAAGATAAAGTAGCATT
TGTTGAAAGTTTTTCAGAGTTGGGAAAATATTTTGATATGCCGATAAAAACTTATTCTTCAGGTATGCGCTCTCGGCTTG
GTTTTGGTCTTAGTATGGCATTTGATTTTGATTATTATTTGGTTGATGAGGTAACAGCTGTTGGTGACATGAGATTTAAA
GAAAAATGTCTTGATGTTTTTAATTCAAAGAGGGGAAAATCGTGTTTCATAATGGTTTCACATAATTTGAATTCTCTAAA
AGATTACTGCGATATGGCTTTTGTTTTTTATGATGAGAATCGTGTGATCCGTTTTGATAACATAGATGAAGCCATATGTG
AATATAAAAATAAAATAATTTTAACTTAA

Protein sequence : 
MIKIESLTKSYRTPKGRHYVFKNLSIEFPTGKSIALIGRNGAGKSTLLRIIGGIDRPDKGEIITQKTISWPVGLSGGFQG
SLTGRENVKFVARLYSRKNELQDKVAFVESFSELGKYFDMPIKTYSSGMRSRLGFGLSMAFDFDYYLVDEVTAVGDMRFK
EKCLDVFNSKRGKSCFIMVSHNLNSLKDYCDMAFVFYDENRVIRFDNIDEAICEYKNKIILT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 9e-102 100
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-75 72
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3035 YP_670919.1 polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 7e-76 72
ECP_3035 YP_670919.1 polysialic acid transport ATP-binding protein KpsT VFG0258 Protein 8e-45 46
ECP_3035 YP_670919.1 polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 3e-45 45
ECP_3035 YP_670919.1 polysialic acid transport ATP-binding protein KpsT VFG2563 Protein 2e-43 42