Gene Information

Name : ECP_3019 (ECP_3019)
Accession : YP_670903.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3175914 - 3176756 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGACATCACAATCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATATCAGCAATGACAGAAA
GTATTGGCGGTAAAGCCGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGAGAAACCGGAA
ACCGCAATGAAAGCCATCACACGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCAGGGATGCTTTCCTT
AATGGATGCACAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGTGAAGCGAACATTC
TGAGCACATTTGAACAACTACACCAGAACAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTACAAAACCAATTGCCCCTGCAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGACTGACCGACTCGTCGACCTGGAAAGAATGCTACATCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGGTCACATCCAGTCCGTTCAGGGTAAAGAGCGCTATGAAGAC
GAGATGTTCATCATTAAATACTTTAAGAAGGGATCTGCACACATCACTTTCAAAAGGCTGGAGCTGATTGACAGAATTAA
CGATATAATAGCCAGGCACTTTCCTTCTGTGCTCTCAGCCTGA

Protein sequence :
MSDITISRPEVVTGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISAMTESIGGKAAPDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQTDRLVDLERMLHLFSGKPIPDNRENITIRLDGHIQSVQGKERYED
EMFIIKYFKKGSAHITFKRLELIDRINDIIARHFPSVLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 4e-131 100
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 9e-130 99
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-126 97
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 5e-126 96
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 5e-126 96
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 4e-126 96
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 4e-124 92
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 4e-124 92
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 2e-122 92
unnamed AAL57572.1 unknown Not tested LEE Protein 9e-123 92
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-121 91
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-118 87
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-117 86
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-117 86
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-106 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_3019 YP_670903.1 hypothetical protein VFG0666 Protein 2e-126 96
ECP_3019 YP_670903.1 hypothetical protein VFG1533 Protein 9e-123 92
ECP_3019 YP_670903.1 hypothetical protein VFG1685 Protein 2e-106 85