Gene Information

Name : ECP_2993 (ECP_2993)
Accession : YP_670877.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3156542 - 3156925 bp
Length : 384 bp
Strand : -
Note : -

DNA sequence :
ATGTACGCAAAATCCTTTATTGCATTTGATGGCAACGGACGTCTGACCGGCGCACGTACTGCACAGGCCGCACCTTATGC
CCGCTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGACACTGAATGTCCCGGGTTTGAACACG
CTGACGACGGGCTGACTGAGTATGGTCATGAGTGCCCTTATGTCAGGCCGGAGCGCAGAGAAATACAGTTGATTAAATGT
CTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCATCACGATTATTA
TGGGGAGCGGTACTGCACTCACTGCCATACCGGGCACTTCAGTGAGGAGGGAGTGGCTGAATGA

Protein sequence :
MYAKSFIAFDGNGRLTGARTAQAAPYARYTCHLCGSALRYHPQYDTECPGFEHADDGLTEYGHECPYVRPERREIQLIKC
LQQFVPDALPVVRKASWHCRQCHHDYYGERYCTHCHTGHFSEEGVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 6e-57 100
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 3e-51 91
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-47 91
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 3e-49 88
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 4e-49 88
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 4e-49 88
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 4e-49 88
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-47 87
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 1e-46 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_2993 YP_670877.1 hypothetical protein VFG0645 Protein 1e-49 88